ggKbase home page

PLM1_100_b1_sep16_scaffold_7427_1

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2..937)

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC, subunit A bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 293.0
  • Bit_score: 356
  • Evalue 1.70e-95
uvrA; excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 291.0
  • Bit_score: 334
  • Evalue 3.30e-89
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 294.0
  • Bit_score: 371
  • Evalue 7.00e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGCGGGCGCGATCATCGTTCGCGGCGCGCGGGTTCACAATCTCCGGAACATCGACGTCGAGATTCCGCGCGACCGGTTCGTCGTTATCACCGGCGTGTCGGGGTCCGGAAAATCCTCGTTGGCGTTCGATACGCTTTACGCGGAAGGACAGCGGCGCTACTTGGAATCACTCGGCGCCGAATCGCTTGGCGCCGACGTGCGCCAGCTGCTGCGCCAAATGGAGAAGCCCGACGTCGACTCGATCGACGGGTTGCCGCCGACGATCGCGATTCAACCAAAGACAAATCTGGCCAATCCTCGTTCTACCGTCGGCACGATCAGCGAAGTCTATGATTATCTGCGGCTGCTCTTTGCCCGAGTCGGACAACCAACTTGCAGCGAGTGCGGCAGCGAGATCAAAGCGTACACCGTCGAGCAAATCGTCGATCATCTGCTGGCGCTGCCGGCGCAGACACGGATTTTGATTTTAGCTCCGATTGCGCCGCCGGGCTCCGGTAATGTTAACCAACGGCTAGCGGAATTGGCGCGATTAGGTTTCACCAGGGTGATGATCGACGGCGAGATACACGAGTTTGCCGACGATTTTCATTTTGACGGTAAAGAACCTCGTCAGCTCGACCTCGTCATCGACCGACTGGTGTTGCGAGAAGGAATTGAAAAGCGCCTGGCGGATTCTCTGGAGGTCGCGTCGCGCCACGGCGACCGAGTCGTTAAAGTTGACGTTCTGGCTGAATACGATCACAGATCAAGCCCGCCATTGCTGTTCAGCCAGAAATTCGTTTGCCTGCAATGCGGCAGCGTCGTCCCCGAATTCACGCCGAGTCTTTTCTCATTTAACAATCCCCTGGGGGCTTGCCCGACTTGCGGCGGACTCGGTGTGATTATCGGAAAACGAAAGCGTCGCAAAAAATCGCCTGGCGGTAAAAGCACCGAG
PROTEIN sequence
Length: 312
MAGAIIVRGARVHNLRNIDVEIPRDRFVVITGVSGSGKSSLAFDTLYAEGQRRYLESLGAESLGADVRQLLRQMEKPDVDSIDGLPPTIAIQPKTNLANPRSTVGTISEVYDYLRLLFARVGQPTCSECGSEIKAYTVEQIVDHLLALPAQTRILILAPIAPPGSGNVNQRLAELARLGFTRVMIDGEIHEFADDFHFDGKEPRQLDLVIDRLVLREGIEKRLADSLEVASRHGDRVVKVDVLAEYDHRSSPPLLFSQKFVCLQCGSVVPEFTPSLFSFNNPLGACPTCGGLGVIIGKRKRRKKSPGGKSTE