ggKbase home page

PLM1_100_b1_sep16_scaffold_72430_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1246..1482)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding domain protein, excisionase family bin=GWC2_Deltaproteobacteria_56_8 species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 71.0
  • Bit_score: 62
  • Evalue 2.10e-07
excisionase similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 64.0
  • Bit_score: 60
  • Evalue 1.70e-07
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 78.0
  • Bit_score: 89
  • Evalue 1.30e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGCAAGAAAATTTATTAACCGCGGAACAAGTGGCGCGGTATCTTCGCGTCGATAGGTTCACGGTCTACCGCTTGGTTACACAGAAAAAAATTCCCGCATTCAAAGTTGGCAACCAATGGCGCTTCAAAAGAGAACTGTTGGACGAGTNNNNNNNCAACCAATGGCGCTTCAAAAGAGAACTGTTGGACGAGTGGTTAAAGAAAAACTCTAATTTAACTTCAGACAGCGGTACTTGA
PROTEIN sequence
Length: 79
MQENLLTAEQVARYLRVDRFTVYRLVTQKKIPAFKVGNQWRFKRELLDEXXXNQWRFKRELLDEWLKKNSNLTSDSGT*