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PLM2_30_b1_sep16_scaffold_1722_2

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_21

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: 415..1284

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 286.0
  • Bit_score: 491
  • Evalue 3.10e-136
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 289.0
  • Bit_score: 554
  • Evalue 7.10e-155
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 272.0
  • Bit_score: 367
  • Evalue 3.20e-99

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAAAAGAGTTATATGGCTGCTGAAGATAGCGATACCGGAATTAAGATTTACCTGCGCGAAATCGGGCAGATCCCTCTTCTGACTCCTGATCAGGAGATCGACCTGGCTGCAAAGATCAAGAAGGGTGATCGCGAAGCGCGCGCCCTGATGATCCGGTCAAACCTGCGTCTGGTGGTGAAGATTGCGCATGACTATGCCAATCTCGGCCTGCCGCTTCTAGACCTGATTTCCGAAGGCAACATCGGTCTGATGAAGGCGGTGGAACGCTTTGACCCTGCGAAAGGTGGAAAGCTCAGCACCTACGCCGCATGGTGGATCAAACAATCCATCAAACGTGCGTTGGCCAATCAGAGCAAGACCATCCGTCTGCCCGTGCATTTGGTGGACAAAATCTCCAAAATGCGCCGGGTTTCGCTGCAAATGAGCGAGGAGCTGGGCCGCGAACCGACGGACGAAGAACTGGGTGATGAGATCGGAATTGCGAGCGGAAAAGTTTCGCAGCTCAAAACGGTGTCGATTCGTCCGGCTTCACTCGATGCGCCGATCAGCGATGATGATTCCACCGAGTTCGGTGAGATTGTCGGCGACGAGGAGGCTCAAACGCCCTTTGAGTTATTGCGTGATAAGAATCTCCGCAATGAGGTCGGCGGTTTGCTCGATGTGTTGGACGATCGCGAGAAGAAGATCATTTTCCAGCGCTTCGGTCTGGATGGCGGAAAGCCAAAAACGCTAGAGGAAGTCGGCAAGAAATTCGGCGTTACGCGGGAGCGCATTCGGCAGTTACAAAATATCGCGCTCTCGAAACTTCGCCGTGCGCTCAGCAAGAAGGAGCGCCCGGTGGACGTCGAATTGCCGGTCGAAGCGTAA
PROTEIN sequence
Length: 290
MKKSYMAAEDSDTGIKIYLREIGQIPLLTPDQEIDLAAKIKKGDREARALMIRSNLRLVVKIAHDYANLGLPLLDLISEGNIGLMKAVERFDPAKGGKLSTYAAWWIKQSIKRALANQSKTIRLPVHLVDKISKMRRVSLQMSEELGREPTDEELGDEIGIASGKVSQLKTVSIRPASLDAPISDDDSTEFGEIVGDEEAQTPFELLRDKNLRNEVGGLLDVLDDREKKIIFQRFGLDGGKPKTLEEVGKKFGVTRERIRQLQNIALSKLRRALSKKERPVDVELPVEA*