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PLM2_30_b1_sep16_scaffold_3141_13

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_21

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: comp(11857..13101)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein Tax=Verrucomicrobium spinosum RepID=UPI000174561A similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 411.0
  • Bit_score: 276
  • Evalue 2.90e-71
Type II secretion system protein {ECO:0000313|EMBL:EEF57197.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 425.0
  • Bit_score: 274
  • Evalue 1.60e-70
gspF; general secretory pathway component, cryptic similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 410.0
  • Bit_score: 263
  • Evalue 9.40e-68

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCCACAGTTCGCTTACCGTGCCCGCAATTCCCAGGGCGGCCTCGTTGAAGGCGTGCTCGAATGCGCTGATCGAGCTCTTGCGATCCGGCAAATTGAATTGCAACAATGTATCCCGGTCCGCATCGAATTGGTGGGACCGGAACCGAAAACGAAAACAGGAGAGGGCGCAGCACCCGCGTCTCCTGTCCAGAATCTGAAGATTCCGCACGGCCAGTTGCTCATTTTCACTGAGCAGCTCGCCCATTTGCTACAAGCGGGAATGACGCTCGACGAAGCGTTGTCGATTTTAGAAAAGCGTTTGAAGCAGCCGCGCGTCCAGCAAATGACGCATAGTTTGCATCAGGCCCTGGTCGATGGCCGCAGTTTTTCGCAGGCGCTCGGTGAGCTGCCGCGAATTTTCCCGCCGCTCTATGTAAATTTGGTGGCCGCTGGTGAGGCCAGCGGTGCGCTGCCGCAAATTCTGCTTCGGCTGGTGAAGCATCTGACGCAGGCAAAAGAACTGCGCGATCGAGTGCAACAGGCTTTGATTTATCCAGCCTTTCTCGCGCTGGCTGGCGCCGTTCTCGTCACGATCTTTATTACGTTCATGGTGCCGCAGTTAACTGGTTTCATGGCTCAAACCGGCGGCGCGCTTCCTTTGCCGACACGGATTCTGCTGCAAATTCATCATGCGATCACGGGCTATTGGTGGGTCGGCTTGCTGGCAGTGATCGGCGCAGTCATCGGTTTCCGCGCACTTGTGCGCAGTGAGGAAGGGCGCATCGGATGGGATAGGTTCCGGCTGCTGATGCCTGGATACGGACGAGTCATTCGCCACCGTTACTATGCGCAGTTCTCGCGCACATTGGGAACCTTGATGGAAAATGGCGTTCCTCTCCTTCGCGCGCTCGATTTGGTAACTGAAATTGCCGGCAACCGTTTTCTGGAAGTCAAGCTTCGCGACGTGCGCAGGGCAGTCATCGATGGCGCGACGCTCTCCGCTGCTCTGCAAGAGCAAAAAATGTTTCCGGATTTGTTTACCGACATGATGGCGGTAGGAGAACAAACCGGGCATTTCGCCGAGACTATGCAAGCTATCGCTGACGTTTATGAGCGCGAACTTGACCGGAGCGTCGGCGTAATCTCGCAATTGATTCCACCGATCATCATCGTGATAATCGCGGTTCTCGTTGGACTGGTTGTCTTCAGTATTCTATCGGCGGTGTTTGAGATGACACACAGTTTGCAAGTCAAGCCGCGTTGA
PROTEIN sequence
Length: 415
MPQFAYRARNSQGGLVEGVLECADRALAIRQIELQQCIPVRIELVGPEPKTKTGEGAAPASPVQNLKIPHGQLLIFTEQLAHLLQAGMTLDEALSILEKRLKQPRVQQMTHSLHQALVDGRSFSQALGELPRIFPPLYVNLVAAGEASGALPQILLRLVKHLTQAKELRDRVQQALIYPAFLALAGAVLVTIFITFMVPQLTGFMAQTGGALPLPTRILLQIHHAITGYWWVGLLAVIGAVIGFRALVRSEEGRIGWDRFRLLMPGYGRVIRHRYYAQFSRTLGTLMENGVPLLRALDLVTEIAGNRFLEVKLRDVRRAVIDGATLSAALQEQKMFPDLFTDMMAVGEQTGHFAETMQAIADVYERELDRSVGVISQLIPPIIIVIIAVLVGLVVFSILSAVFEMTHSLQVKPR*