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PLM2_30_b1_sep16_scaffold_4636_6

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_13

partial RP 38 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(4365..6359)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 663.0
  • Bit_score: 877
  • Evalue 8.40e-252
Transcription-repair-coupling factor Tax=Chthoniobacter flavus Ellin428 RepID=B4CX01_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 663.0
  • Bit_score: 877
  • Evalue 6.00e-252
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 671.0
  • Bit_score: 679
  • Evalue 5.20e-193

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1995
CCTGCTTCATCAAAAAGCACAGCCGACACGGCTGTCACTACAGAAGATGGAGCTCAGGAAGTCCTCGCGCTCGAGTTTGCCAACGAAGCAAAAGTCTACGTCCCGCTCGAACAAGCCTATCTGGTTTCGCGTTACGTCGGTGTCGGCAAAAAGTCGCCGCAGCTCAGTTCGCTCGGGGACGCGAAATGGACGCGCGCCAAGAAAAACGCCGTGGCTTCCATTTTCGATTACGCCGGCAAGATGCTTGCACTTCAGGCAGAACGGCAGACGCATCCCGGTCACCCGTTTGCCCCTGACACAGGATGGCAGGCGGAATTTGAGGATTCGTTTCCTTTTCGCGAAACGCCGGATCAAATGAAGGCGATCATCGATACAAAAATCGACATGGAGCGCCCCCAACCGATGGACCGCTTGATCTGCGGCGATGTCGGCTTCGGCAAAACGGAAGTCGCAATTCGGGCCGCGTTCAAAGCAGTTATGGACGGGAAACAGGTCGCGGTTCTCGCGCCGACTACCGTCCTCGCTCAGCAACATTTCGAGGTGTTCCGGCAGCGCATGCTCGATTACCCGGTGCGAATCGAGATGCTCAGCCGCTTCCGTTCGCAGGCGGAACAGAAGAAAGTGTTGCAGCTGCTGCGCGGAGGCGGCGTCGATATTGTCATCGGCACGCACAGGCTTATCTCCGGCGATGTCGTTTTCAAAGATCTCGGCCTGGTGGTAATCGACGAGGAGCAACGCTTTGGCGTTCTGCACAAAGAGAAATTCAAAGAGCTGTTTAAACTTGTCGACCTCCTGACGCTCTCCGCCACGCCAATCCCGCGCACGCTTTATCTTTCGCTCGTCGGCGTCAAAGACATGTCCACGATTGAGACCCCGCCGCTCAACCGCCTGCCGGTAGAGACGGTCGTGTCCGCCTACGATGAGCGGATCATTCGCGATGCGATCAATCGCGAACTCGAGCGTCAAGGTCAGGTTTTCTTCTTGCACAACCGAGTCCAAACGATCTCTCTCGCGCGCGATCGCGTTGTTCATCTTTGCCCGCAGGCCAGGGTCGAGATCGGCCACGGCCAGATGGATTCGGACGAACTGGAAGCGGTCATGGCGCGATTCATCGCCGGTAAGATCGACGTGCTGGTTTGCACGACGATTATCGAAAGCGGTCTCGATATCCCTAACGCCAATACCATTATCATCGATCGCGCCGACAGATTTGGTCTCGCCGATCTCTATCAACTGCGCGGACGCGTCGGCCGGGCCGAGCACAAAGCGTACGCCTATCTGCTTCTCCCGCGCGAAATGATGACACTTGGCGCAGCGCGCAAGCGGATCAGCGCCATCAAGCAATACAGCTCACTGGGCGCCGGCTTTCGCATCGCGATGCGCGATCTGGAGATCCGCGGCGCGGGCAGCATTCTGGGCACGGCGCAAAGCGGCCACATTATGGCGGTTGGTTTCGATTTATACTGCCAGTTGCTCAAGCAGGCGGTTGGGCAACTCAAAGGTGAGAAACTACTGCTCCGGCTTGATGTCGATCTACGCCTCGATTTCGTCGCCACCAATGAAGCCCAGTTCGTGCAAAGTAGAAGCGACACCTCGCCGCTTTCCCGCCAAGACAAGCGACGAGGCCTTCCTTCTACTAACGGGCGCGTGCCCGCCTTTGTGCCCAGCAGTTTTATCAGCGACGCAACCCTGCGCATCCGAGCGTATCGCGATATTGCGCAAATCACTACACATGAGCAGCTCGATCGCCTGCGGCGCGATTGGCGCGATCGCTTTGGCTCATTCCCGACGGCGGTTGACAATTTGTTTCTTCTCACCGAAATCAAGCTCGCTGCGGCAAAATCCGGGGCGAGCCGCGTCGAAGTGCGCGAACGCAAATTGATGTTGACCCGGGGCGGAGATTTTATACTTGTCGCGGGCAAATTCCCCCGTTTAGTTGGAACCAAAATCGAACAGCACCTCAGGGAGATTCTGGAGTTGATTAACAAACTATGA
PROTEIN sequence
Length: 665
PASSKSTADTAVTTEDGAQEVLALEFANEAKVYVPLEQAYLVSRYVGVGKKSPQLSSLGDAKWTRAKKNAVASIFDYAGKMLALQAERQTHPGHPFAPDTGWQAEFEDSFPFRETPDQMKAIIDTKIDMERPQPMDRLICGDVGFGKTEVAIRAAFKAVMDGKQVAVLAPTTVLAQQHFEVFRQRMLDYPVRIEMLSRFRSQAEQKKVLQLLRGGGVDIVIGTHRLISGDVVFKDLGLVVIDEEQRFGVLHKEKFKELFKLVDLLTLSATPIPRTLYLSLVGVKDMSTIETPPLNRLPVETVVSAYDERIIRDAINRELERQGQVFFLHNRVQTISLARDRVVHLCPQARVEIGHGQMDSDELEAVMARFIAGKIDVLVCTTIIESGLDIPNANTIIIDRADRFGLADLYQLRGRVGRAEHKAYAYLLLPREMMTLGAARKRISAIKQYSSLGAGFRIAMRDLEIRGAGSILGTAQSGHIMAVGFDLYCQLLKQAVGQLKGEKLLLRLDVDLRLDFVATNEAQFVQSRSDTSPLSRQDKRRGLPSTNGRVPAFVPSSFISDATLRIRAYRDIAQITTHEQLDRLRRDWRDRFGSFPTAVDNLFLLTEIKLAAAKSGASRVEVRERKLMLTRGGDFILVAGKFPRLVGTKIEQHLREILELINKL*