ggKbase home page

PLM2_30_coex_sep16_scaffold_1319_2

Organism: PLM2_30_coex_sep16_Actinobacteria_68_21

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(634..1293)

Top 3 Functional Annotations

Value Algorithm Source
TrkA-N domain protein Tax=Frankia sp. CN3 RepID=G6HI07_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 206.0
  • Bit_score: 196
  • Evalue 2.00e-47
TrkA-N domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 223.0
  • Bit_score: 196
  • Evalue 7.50e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CN3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGCGAGTGATCATCGTCGGGTGCGGGCGGGTGGGGTCCGAGCTCACCATCCAACTGGGCAAGGCCGGCCATGACGTCACGATCGTGGACAAGCGCCCCACGGCCTTCGACCGGCTGCCCCCCGGCTTCGAGGCTCGGACCCTGGTCGGCTTGGGGTTCGACCGGGAGCTCCTGGTGGAGGCCGGGGTCAAGGAGGCGGACGCTTTCATCTCGGTGACGAACGGGGACAACTCCAACATCGTCTCCGCCCGGGTGGCCCGCGAGTACTTCCACGTGCCCAAGGTCATCGCCAGGATCTACGACCCTCGGCGAGCCGAGATCTACGAGCGGCTGAACATCCCCACCGTGGCCACCACGACCTGGGGGGTGAAGCAGATCCTCCTGATGCTGTCCCACGAACGCGAGGAGATCAAGGAGAGCCTGGCCGGCGGGGACCTGTTCCGGATGCGGCTGGAGATCGCGCCGCATCTGGTCGGCAAGCCCGTCCGCGCGCTGAATGTGGAAGGGAAGATCCTCGTGGCCGGTGTGGACCGGGGCGGACATGGATTCATCCCCGGCGCATCGAGCTCCTTCCAGGAAGGCGACATCGTCCACCTCATCTTGCACAAGGACGCCGTGGACCTGCTCGACGAGATGCTCGCCCCCGGAGCGGAGCACTAG
PROTEIN sequence
Length: 220
VRVIIVGCGRVGSELTIQLGKAGHDVTIVDKRPTAFDRLPPGFEARTLVGLGFDRELLVEAGVKEADAFISVTNGDNSNIVSARVAREYFHVPKVIARIYDPRRAEIYERLNIPTVATTTWGVKQILLMLSHEREEIKESLAGGDLFRMRLEIAPHLVGKPVRALNVEGKILVAGVDRGGHGFIPGASSSFQEGDIVHLILHKDAVDLLDEMLAPGAEH*