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PLM2_30_coex_sep16_scaffold_3194_3

Organism: PLM2_30_coex_sep16_Actinobacteria_68_21

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(798..2114)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Frankia RepID=Q6TE13_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 286.0
  • Bit_score: 452
  • Evalue 4.10e-124
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 262.0
  • Bit_score: 451
  • Evalue 2.60e-124

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Taxonomy

Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
TTGACCGAAGTGGCGCGAGACCTCGGTCTGGAGGAGGCGAAGGAATCGATCGCCGCCCGCGGCCGGGAACGAGGGTTCGTCACCTCGGACGACCTGCTGGAAGCCGTCCCAGTCGATGACTTCACCCCCGAGCAGGTCGAAGAGTTCCTGACCCAGGTCGAGGAGCACCTTCGGAACGAGGGTATCGAGGTCATCGAGGTCCCCGGTGACGACCTCGTCGAGCCGGGCGTGGCCGCTCGCCTGGACGTCGACCTGCTGAAGGCGCCGACGAACGACCCGGTCCGGATGTACCTGAAGGAGATCGGCAAGGTCCCCCTCCTTACCGCGGCCCAAGAGGTCGACCTGGCCAGGCGGATCGAGGCCGGCGAGTTCGCCACCGAGCTGTACGACGTCCACGAGAGCGAGGATGGCAACGGCAAGGTCGACGGCAAGCGCCTTCGGATCGTCGTGGAGCGGGTGGTGGCCATCCGCGAGCACCAACAGGACAAGTTCGGCAAGGTCGAGGGCATCGGCCGGGACCGCATTCCCAAGAGCTGGAAGCCCAAGGCTCAGGAGGACCTGGAGGACTTCCTCCGCCGCGTGGAGCGCGACGGTCAGCTGGCCAAGAAGAAGCTGATCGAGGCGAACCTCCGTCTGGTGGTCTCGATCGCGAAGCGATACGTGGGACGCGGCATGCTGTTCCTGGACCTGATCCAGGAGGGAAACCTGGGGCTCATCCGCGCGGTTGAGAAGTTCGACTATTCGAAGGGCTACAAGTTCTCGACGTACGCCACGTGGTGGATCCGTCAGGCCATCACCAGGGCCATCGCCGACCAGGCCCGAACCATCCGTATCCCCGTGCACATGGTCGAGACGATCAACAAGCTGGTGCGGGTGCAGCGCCAACTGCTCCAGGACCTCGGCCGCGAGCCAACGCCGGAAGAGATCGGGCGGCAGATGGGCATCCCCGCGGAGAAGGTCCGGGAGATCCTGAAGGTCTCGCAGGAGCCGGTGTCGCTGGAGACGCCGATCGGCGAGGAGGAGGACTCCCATCTCGGGGATTTCATCGAGGACTCCGAGGCCGTGGTTCCGGTGGACGCCGCATCGTTCATCCTCCTCCAAGAGCAGCTCGAAGCAGTGCTGCACACGCTGTCGGAACGGGAGAAGAAGGTGATCCAGCTCCGCTTCGGGCTCCTCGACGGCCACCCCCGGACGCTCGAGGAGGTCGGGCGGGAGTTCGGAGTCACCAGGGAGCGGATCCGCCAGATCGAGTCGAAGACCCTGTCGAAGCTGCGGCACCCGTCACGGTCGCAGAAGCTCCGCGACTATCTGGAGTAG
PROTEIN sequence
Length: 439
LTEVARDLGLEEAKESIAARGRERGFVTSDDLLEAVPVDDFTPEQVEEFLTQVEEHLRNEGIEVIEVPGDDLVEPGVAARLDVDLLKAPTNDPVRMYLKEIGKVPLLTAAQEVDLARRIEAGEFATELYDVHESEDGNGKVDGKRLRIVVERVVAIREHQQDKFGKVEGIGRDRIPKSWKPKAQEDLEDFLRRVERDGQLAKKKLIEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIRAVEKFDYSKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVQRQLLQDLGREPTPEEIGRQMGIPAEKVREILKVSQEPVSLETPIGEEEDSHLGDFIEDSEAVVPVDAASFILLQEQLEAVLHTLSEREKKVIQLRFGLLDGHPRTLEEVGREFGVTRERIRQIESKTLSKLRHPSRSQKLRDYLE*