ggKbase home page

PLM2_30_coex_sep16_scaffold_5434_6

Organism: PLM2_30_coex_sep16_Actinobacteria_68_21

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2742..3260)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB16_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 167.0
  • Bit_score: 125
  • Evalue 3.40e-26
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 167.0
  • Bit_score: 125
  • Evalue 9.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAACCGCGAGCCGACCGTCGTGGTCGGCCGCATCACCCGGCCCCACGGCCTGAAGGGCGAGCTCTCCGTCCTGGTGCTGTCGGAGGTCGAAGGGCGATTCGCCGACGGGGCTGTGGTCTATCGTGAGGACGGCAAGCCGCTCACCGTCGAGTCGGCGCGCCGTCACCGCGGTGGGCTGCTGGTGAAGTTCCGCGAGGTCCCCGACCGGACGGCCGCCGAACGCCTGTCCCGAAGCGTCCTGGTGGTGCCCGAGTCCGCGTCTCCGCACCTCCCCGACGGCTCATGGTGGGACCACCAGCTCGTGGGCTGCGCGGTGGTCACCGAGTCGGGCCGTCCGTTGGGGACCGTGCGCGAGGTGATCCACACGGCAGCGAACGATGTGTGGAGCGCGGTATCGGATGAAGGCGAGACGCTGATCCCTGCACTCAAGGACGTGGTCGTATCGGTGGACACGGCGGGCAAGCGCATCGTGGTCCGCAAGGTCCCCGGCCTCACGGTCCCGGAGGCGGAGCCGTAG
PROTEIN sequence
Length: 173
MNREPTVVVGRITRPHGLKGELSVLVLSEVEGRFADGAVVYREDGKPLTVESARRHRGGLLVKFREVPDRTAAERLSRSVLVVPESASPHLPDGSWWDHQLVGCAVVTESGRPLGTVREVIHTAANDVWSAVSDEGETLIPALKDVVVSVDTAGKRIVVRKVPGLTVPEAEP*