ggKbase home page

PLM2_30_coex_sep16_scaffold_6539_3

Organism: PLM2_30_coex_sep16_Actinobacteria_68_21

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 824..1570

Top 3 Functional Annotations

Value Algorithm Source
sigma-B/F/G subfamily RNA polymerase sigma-28 factor Tax=Frankia sp. BMG5.12 RepID=UPI0003758A5A similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 265.0
  • Bit_score: 257
  • Evalue 8.40e-66
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 252.0
  • Bit_score: 256
  • Evalue 5.30e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. BMG5.12 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGGAATCATCCGGCGATGAGGAGCGATCCGACGAACGCGTCGCCGAGCTCTTCCGGCAACTGCCGGATCCCAAGGCGCGCGAGGAGCTCGTCCGGGTCTATCAGCCGCTTGCCGAGTACCTGGCCAGGAAGTTCTCCGGACGAGGCGAGCAGGTCGAGGACCTCGTCCAGGTGGCCATGATCGGTTTGTTGAACGCGATCGACCGCTTCGATCCCGGGCGTGAGGTCCAGTTCCCCACGTACGCGGCGGTCACGATCATCGGGGAGCTCAAACGGCATTTCCGGGACAAGGGGTGGGCCGTTCGGGTCCCCCGGCGCCTCCAGGAGACCGGCCTTCGCGTCAGCCGGGTCATGGGCAATATGTGGCAGGAGCTCGGACGTTCGCCCACGGTCAAGGAGATCGCTGCTCGCCTCGACCTTCGGGAGGAAGAGATCCTGGAGGCCGTCGAGGCCATGCAGGCATACTCGGCGACGTCGCTCGAGGCGCCGATCGGCGACGAGGGCCCGTCCCACGCCGAGCTCCTGACTAAAGACGACGAGTCGCTCGAGCTGATGGAGGCATGGGCAAGCGTCGCACCCAAGCTCAAGCAGCTGCCCACCCGAGAACGCAGGATCCTGTACCTGCGGTTCTTCAAGGGCCTCACGCAGAGCGAGATCGCCGAACAACTCCAGATCTCACAGATGCACGTGTCTCGTCTGCTGTCGCAGACACTCGTTCGCCTACGAGAAGCGATCCGGGAGCCGTAG
PROTEIN sequence
Length: 249
VESSGDEERSDERVAELFRQLPDPKAREELVRVYQPLAEYLARKFSGRGEQVEDLVQVAMIGLLNAIDRFDPGREVQFPTYAAVTIIGELKRHFRDKGWAVRVPRRLQETGLRVSRVMGNMWQELGRSPTVKEIAARLDLREEEILEAVEAMQAYSATSLEAPIGDEGPSHAELLTKDDESLELMEAWASVAPKLKQLPTRERRILYLRFFKGLTQSEIAEQLQISQMHVSRLLSQTLVRLREAIREP*