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PLM2_30_coex_sep16_scaffold_1729_9

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 9278..9856

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AW11_HERA2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 162.0
  • Bit_score: 127
  • Evalue 7.70e-27
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 162.0
  • Bit_score: 127
  • Evalue 2.20e-27

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Taxonomy

Herpetosiphon aurantiacus → Herpetosiphon → Herpetosiphonales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 579
GTGCGGCGCGTCCAGGCTGACGATCTCGACGCCTTCGAGGAGTTCTTCGCCCGCTATCGCAACCCCATCTATCGGACGGCCTACGGGCTGACCGGTGATCGGCAGGCTGCGGAGGAGATCCTCCAGGACACGTTCGCTCGTGCCTACCAGCACCGGCACGCGCTGCGCCTGGACATCTCGCCGCTGCACTGGTTGCATCGCGTCTCGCTGAACTTGTGCTACTCGCGCCTTTCTCGGCGCCGGCTCGTTGCGAGCCCGATCGACGAGGCGACGGCCCAGACCTTGCCCGATGACCGGCAGCTGCCGGCCGATCGGGTCGAGGAGGAGGAGCTGCGCCTGATCGTGCGCGACGGGATCGCGACCCTGCCGGAGAAGCACCAGGCCGTCATCGTCCTCTACTACCTCCACCGCCATTCGCTCCAGGAGACGGCCGATGCGCTCGGCATCCAGGTCGGGACGGTGAAATCGCGGCTCCATTACGCGCTTCGCAGCCTGCGCGGCCACTTCGAGGATCATCGCCGGATCGGGGACGAGTACCTGCCGGTCATGCGCGAAGAGATGGGTCCGAAGTCACTGTGA
PROTEIN sequence
Length: 193
VRRVQADDLDAFEEFFARYRNPIYRTAYGLTGDRQAAEEILQDTFARAYQHRHALRLDISPLHWLHRVSLNLCYSRLSRRRLVASPIDEATAQTLPDDRQLPADRVEEEELRLIVRDGIATLPEKHQAVIVLYYLHRHSLQETADALGIQVGTVKSRLHYALRSLRGHFEDHRRIGDEYLPVMREEMGPKSL*