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PLM2_30_coex_sep16_scaffold_1955_5

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 3328..3900

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 181.0
  • Bit_score: 129
  • Evalue 2.60e-27
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 176.0
  • Bit_score: 101
  • Evalue 1.70e-19

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 573
ATGACAGGTCGCTCGGAGGGACGATTGGACCCGGCACTCATCAGGCGGGCCCAGGACGGCGACGTGGAAGCATTCACGGCGCTCGTCGCCGGGAGGATCGACCCGATGACGCGGACGGCGATGGCCATCCTCGGCCACGACGCAGACGCTCGCGACGCCGTCGCGGACGCGCTGGGCGCCGTCTGGCGCGGCCTCCCGCGGCTGCGCGACCCGCTGGCGTTCGAGGCGTGGTCGACGCGAATCCTCGTTCACGCCTGTCGTCGCGCACTGCGGCGACGGGGTCGCGAGCGGGTCCACGAGGTCGCGATCGACGCCGAGGGGGCGCCCGAGGCAGGGCCGGCCGGGCCGAAGGTAGCCGGGCCTGCCGACGAGGTGTCCGGCAGGATCGCCCTGGAGCGGGCATTCGACCGATTGGACGCCGACGCCCGCGCGATCCTCGTCCTCCATCACCTCGACGGGCGGCCGCTCAGCGAGATAGCTGCGGTGCTCGGCGTGCCGGTCGGCACGGCGAAGTCGCGGCTTTACACCGCCCGCCGGGCGCTCGAGCGCGCGCTTGAACGAGAAGACCGATGA
PROTEIN sequence
Length: 191
MTGRSEGRLDPALIRRAQDGDVEAFTALVAGRIDPMTRTAMAILGHDADARDAVADALGAVWRGLPRLRDPLAFEAWSTRILVHACRRALRRRGRERVHEVAIDAEGAPEAGPAGPKVAGPADEVSGRIALERAFDRLDADARAILVLHHLDGRPLSEIAAVLGVPVGTAKSRLYTARRALERALEREDR*