ggKbase home page

PLM2_30_coex_sep16_scaffold_123_29

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(27134..31627)

Top 3 Functional Annotations

Value Algorithm Source
Alpha amylase catalytic region Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLL9_ROSCS similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 1393.0
  • Bit_score: 1455
  • Evalue 0.0
alpha amylase catalytic domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 1393.0
  • Bit_score: 1455
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseiflexus castenholzii → Roseiflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 4494
ATGCCCGCTTCGCTGCGCCAGACCACCGCCCGAGGGTTCCGTTCGCGCCTTCGCGTGGTCGCCGGATCCGTCCTCCTGCTCGGCGCACTCGTCCCGGCGGGCAGCCCGCTGCCGGTTCTCGCGAGCCACACGCCCGCGCCGTCCGCCGTAACAATCGCCGGAAGCCTCCAGTCGGAGCTGGGCTGCAGCGGCGACTGGCAGCCCGACTGCGTCACGACTCATCTGACCTACGACGCGTCAGACGAGGTCTGGCAGGGCACGTTCAGCGTTCCTACGGGGAGCTGGGAATACAAGGCGCCCCTCAACAACGCGTGGGACGAGAACTACGGGCTCCACGGCGTCGCCAACGGTCCGAACATCCCGTTCACGCTCGGCGCCCAGACCAGCGTGAAGTTCTACTACGACCACGAGACCCATTGGGTCACCGACAACGTCGGCTCCGTCATCGCCGTCGCGCCCGGCAGCTTCCAGAGCGAGATCGGTTGCCCCGGTGACTGGCAGCCCGACTGCCTGCGGTCGTGGCTGGAGGACGTCGACGGCGACGGCACGTACACCTTCGAGACGACCGCCATTCCCGCCGGCGACTACGAGACAAAGGTCGCGCTCAACGAGAGCTGGGACGTGAACTACGGGGCCGGCGGCGTCCAGGGCGGCCCGAACATCCCATTCACGGTACCGGCGGCGGATTCGACCACGACGTTCAGCTACGACAGCACCAGCCATGTCCTGACCGTCAGCAGCATTGGCCCGGGCGGCCACGCCCACGACAACAACGTCGAGTGGGACGGCCTCCGCCACGACTCTCGCGACACGCTCTATCGGACGCCCGGTGGGGCGGTTCCCGCAGGAACCGGCGTCATCCTGCGACTCCGGACGTTCCACGACGACGTCACGGCCGTCGGCGCCCGGATCTTCAGCCTGCGGACGGGCGGCGCCCAGGTCGTCCCGATGAAGCTCGCCGCCTCGGATGTCGGCTGTGCCCAGGCGTCGCTCGCGGCCGACAGCTGCGACTACTGGCAAGCGTCAGTGCCGGGATCGCTCGCCGGCCAGCCGGACAACCTCTGGTACCGCTTCGTCGTCACCGACGGCACGGACACCGACTACTACGGCGACAACACGCCGGCGCTGGACGGCGGCCTGGGCTTGGCCACCGACGACGCGGTCGACCAGAGCTGGGCGCTCATGCAGTACGTGCCTGGCTTCACCGCGCCTTCGTGGGCCAAGGATGCCGTCATCTATCAGATCTTCCCGGATCGGTTCCGCAACGGCCGCAAGGACAACGACCCGAAGACCGGCGACGTCAGATACGACGAGCCTGTCATCAAGCTCGGCTGGGGGACGCTGCCGGAGGGCTATTGCCGCGGCTACGCCGTCCCGGACGCCGCGTGCCCCAACCGCTTCGACCCGGGCGCAACCGGGCGCGAGGGGCCGCGGGGCCGCGACTACATGGGCGGAGACCTCAAGGGCGTCGACCAGCAGATCGACTACCTCGCCTCCCTCGGCGTCAACGCGATCTACTTCAACCCGATCTTCGACGCAGCTTCGAACCACTCGTACGACACCCAGGATTACAAGCACATCGACCCGTATTTCGGGAGTCAGAAGGACTTCGACAACCTCGTCAAGCATGCAAAGTCCGCGGGCATCCGGGTGATCCTTGACGGGGTCTTCAACCACATGTCGTCGGACAGCCCGCTGTTCGACAGGTATCACCACTACGCGACGGTCGGCGCCTGCGAGTCGACGAGCTCGGCGTATCGGACCTGGTTCGTCTTCACCGAAGTCGGCGCCGGCAACGGCAAGTGCGCCGGGGCGAATGGGGCTCTGTCGGCCGACTACGAGGGCTGGTTCGGCTTCGACTCGATCCCCGTCCTGCTCAAGACCCAGGCTGCGGTCCAGACCTACTTCCTGACCGCGCCGAACAGCATTGCGAAGCAGTGGATCCTGGCCGGCGCGTCGGGCTGGCGGCTCGACGTCTCCGGCGATCCGTCCTTCCCGAATGGCTACTGGGAGTCCTTCCGGTCGGTCGTCAAAGCAGCCAATCCGCAGGCCCTGACGATCTCCGAGACGTGGCAGAAGGACTCGACGCTGCTGCGGATGGTCCGCGGCGATCGGCTCGACACGACGATGAACTATCGGTTCCGCGACGCGGTCCTCGGCTTCCTTGCGCCCCAGGACTTCGACCCCAAGGGCTTCGCCGACAGCGGCCACGCGATCGAGCCATCGACGTTCCTGAGCCGGCTGGCATCGGCCCGCGAGGACTACTCGGACGCGACGTACTACACGCTGATGAACCTCCTCGACAGCCACGACACCGAGCGACTGCTCTGGACGCTGACGCCCGGGCCCGATACGCCGGCGAACAAGGAGGCCAACCCCGCCAGCGTCGCCGCCGGCAAGGCTCGGCTCCGGCTCGCCTCGCTGATCCAGTTCACGGTCCCGGGTGCCCCGACGGTCTACTACGGGGACGAGGTCGGCATGACCGGCGACGACGACCCGGACGACCGGCGAACCTACCCGTGGGCCGACCTCGGCGGCTCGCCCGACACCGCGCTCTTCGGCCACTATCAGTTCCTCGCCGCGTTGCGGAGGAACGTTCCGGCCCTGACCGCCGGCGATTTCCGGGTCCTTCTCGCCGACGACGCGGCGGATGTCGCGGCCTATGGTCGGAAGACCGGCTCGAGCGCCGCGGTCGTCGTCCTCAACCGCTCTGCCTCGCCCCAGCCGGTCCACGTCCCGACCGGCGGCTACCTCCGCGACGGGGTCATGTTCAGCCAGCGATTCCCCGCCGGTGGGCCATCCGCGACGTCGGCCGACGGTGAGCTCGTCGTGACCGTTCCCGCGCTCAGCGGCCTCGTCCTCGTCGCCAATGCGTTCCAGGACCTCGTCGGCCCCGCCGCACCGACGTCGCTGGTCGCAACCGCCGGCGATGGCGCGGTCGATCTTGGCTGGTCGGCGCCCGCTGGAGCGTCGAGCTACCGCGTCTATCGAAGCCCGGTCACCGGGGGCGGTTACGAGCTCATCGGGACAACCTCGACCATGGCCTTCAGCGACACGACCGTCCGCAACGGAACTCGCTACTTCTACGTCGTTCGCGCGCTCGACGCCGCGGGCAACGAAGGTGCGCCATCCAACGAGGCCGCCGCGACGCCGTCGTTCCCGATCGGCTACGCCGTGCTCCAGTGGCCCAAGGAAACGTCGATCACCCGCGGCCAAACGACCGAGACCATCTACGGCCAGGTGTATGTCGCTGGGTTGACCGACTCCGGCGCTCCGGCTTCGGCGATCCGCGCCAGCGTCGGCTTCGGTGCCCAGGGTTCGGATCCAGCCGGCTGGACGACCTGGCGAGCGATGACGATCAACGCCGGCTGCCTGTGCGGCAACAACTACGAATACCAGGGCACGCTGCGCCCGGCGAATGTCGGCGTCTTCGATCTCCTCGTTCGCTTCTCGACCGACGGCGGGCTCACCTGGACGTACGGCGATCAGGACGGCTTCTTCGAGGGCGAATCGGGCACCGATTGGCCCGGCGTCCTGACCGTCTATCCGAGCGACGACATCACGCCACCAGCGGCGCCGACGAACCTCCACGTGACCGACTGGGCAACCGCGTTCATCGAGCTTGCCTGGACGGCCCCGGCCGATCCGGACGTGGCGGAATACGGGATCTACCGGAGCGAGGACGGCGGCCCCTTCGAGCCCCTCGCCACGATCGCGGCGGCGTCGACGACGTACCGCGACGAGAGCGTCGCGAGTGGCACGACCTACGGCTACCGCGTAACGGCGATCGATGGCTCGCTCAACGAGTCGGGCCCATCGAACGTGGTCTCGCAGAAGGCCGAGCCGAAGCTCGTCGACGTCACGTTCCGCGTCCGCGTCCCGGCCTCGACGCCACCTGGCGATACGGTCTACATCCCCGGCAGCATCGATCTGCTCGGACCGTGGGATCCGGCCAAGCAGCCGCTCGTTAACAAGGGCGGCGGCATCTGGGAGGTGACGCTCGCGATCCTCGACGGAACCGTGGTCGAGTACAAGTACACCCGCGGAGCGTGGGAGCGGGTCGAGTGGTGGGGGTCGATCATCAGCACGGCCAACCGCCACGTGACGATTTCGTACGGCAGCGGCGGGACCCAGCTCGTTGACGACACGTCGACCGACTGGGGCTCCGGGCCGGACGACCACAAGGCGGTCCAGTACTGGCGCGATCCGCTGGTCGTCACGGCGACCGGCGGCGCCCTGGGCGCCGTCGCGACGTTCGAGCGGAACATCCAGCCGGAGGCGTCGGACTACTCGACGTCCGTCGTGGTTCGGCTCGGGGCGACGACGATCGGCGGGACCGTGGCCGAAACCAGCGATGGGGTGCTGACCTGGACGCCGTCGTCGGCCCTCGCCGCCGGCACGTACAACGTGACGGTCTTCCACGTGAAGAGCGAGCTGGGCGGCGACAGCGTCTCGATGCAGGCGCCGTACCTCTTCTCGTTCACCGTGCCTTAG
PROTEIN sequence
Length: 1498
MPASLRQTTARGFRSRLRVVAGSVLLLGALVPAGSPLPVLASHTPAPSAVTIAGSLQSELGCSGDWQPDCVTTHLTYDASDEVWQGTFSVPTGSWEYKAPLNNAWDENYGLHGVANGPNIPFTLGAQTSVKFYYDHETHWVTDNVGSVIAVAPGSFQSEIGCPGDWQPDCLRSWLEDVDGDGTYTFETTAIPAGDYETKVALNESWDVNYGAGGVQGGPNIPFTVPAADSTTTFSYDSTSHVLTVSSIGPGGHAHDNNVEWDGLRHDSRDTLYRTPGGAVPAGTGVILRLRTFHDDVTAVGARIFSLRTGGAQVVPMKLAASDVGCAQASLAADSCDYWQASVPGSLAGQPDNLWYRFVVTDGTDTDYYGDNTPALDGGLGLATDDAVDQSWALMQYVPGFTAPSWAKDAVIYQIFPDRFRNGRKDNDPKTGDVRYDEPVIKLGWGTLPEGYCRGYAVPDAACPNRFDPGATGREGPRGRDYMGGDLKGVDQQIDYLASLGVNAIYFNPIFDAASNHSYDTQDYKHIDPYFGSQKDFDNLVKHAKSAGIRVILDGVFNHMSSDSPLFDRYHHYATVGACESTSSAYRTWFVFTEVGAGNGKCAGANGALSADYEGWFGFDSIPVLLKTQAAVQTYFLTAPNSIAKQWILAGASGWRLDVSGDPSFPNGYWESFRSVVKAANPQALTISETWQKDSTLLRMVRGDRLDTTMNYRFRDAVLGFLAPQDFDPKGFADSGHAIEPSTFLSRLASAREDYSDATYYTLMNLLDSHDTERLLWTLTPGPDTPANKEANPASVAAGKARLRLASLIQFTVPGAPTVYYGDEVGMTGDDDPDDRRTYPWADLGGSPDTALFGHYQFLAALRRNVPALTAGDFRVLLADDAADVAAYGRKTGSSAAVVVLNRSASPQPVHVPTGGYLRDGVMFSQRFPAGGPSATSADGELVVTVPALSGLVLVANAFQDLVGPAAPTSLVATAGDGAVDLGWSAPAGASSYRVYRSPVTGGGYELIGTTSTMAFSDTTVRNGTRYFYVVRALDAAGNEGAPSNEAAATPSFPIGYAVLQWPKETSITRGQTTETIYGQVYVAGLTDSGAPASAIRASVGFGAQGSDPAGWTTWRAMTINAGCLCGNNYEYQGTLRPANVGVFDLLVRFSTDGGLTWTYGDQDGFFEGESGTDWPGVLTVYPSDDITPPAAPTNLHVTDWATAFIELAWTAPADPDVAEYGIYRSEDGGPFEPLATIAAASTTYRDESVASGTTYGYRVTAIDGSLNESGPSNVVSQKAEPKLVDVTFRVRVPASTPPGDTVYIPGSIDLLGPWDPAKQPLVNKGGGIWEVTLAILDGTVVEYKYTRGAWERVEWWGSIISTANRHVTISYGSGGTQLVDDTSTDWGSGPDDHKAVQYWRDPLVVTATGGALGAVATFERNIQPEASDYSTSVVVRLGATTIGGTVAETSDGVLTWTPSSALAAGTYNVTVFHVKSELGGDSVSMQAPYLFSFTVP*