ggKbase home page

PLM2_30_coex_sep16_scaffold_5048_9

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(6936..7985)

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 349.0
  • Bit_score: 563
  • Evalue 1.00e-157
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 373.0
  • Bit_score: 395
  • Evalue 1.30e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1050
ACCAAGGAGCTTCTCAAGGAAGCCAAGAAGGTCGTCCACACGTACAACGAGAAGCTCGATCCGGACTCGTTCCTGGCCCTGCTCGACTGGGCCTACTTCGCGGTCCACAACGGCGATCTCGACTCGCGCGACAACGTCGGCCTGCAGGCGATCCACACGTGGTCACGCGACGAGGTTGCCTACCCGGCGCTCGAGCGTTGGATCACCTCTGGCAAGGACGCCGAGCTGATGAAGCGGCTCGGGTTCGACCCCGAGGTGCCGCTCAACACGAAGCTGGCTCACCGCAAGGGCGAGCTCGTGCGGATCGGGCGCGACGCGCGAGAGCAGCTGACCTCGGCGAACCTGCGGCTCGTCGTGTCGATTGCGAAGAAGTACATCGGGCGCGGGATGTCGTTCCTCGATCTCATTCAGGAGGGCAACATCGGCCTCATCCGGGCGGTCGAGAAGTTCGACTACGAAAAGGGCTTCAAGTTCTCGACCTACGCGACGTGGTGGATCCGCCAGGCGATCACCCGCGCGATCGCCGACCAGGCCCGGACGATTCGGATCCCGGTCCACATGGTGGAGACGATCAACCGCCTGATCCGCGTCTCGCGGCAGCTCCTCCAGGAGCTGGGACGAGAGCCGACGGTCGAGGAGATCGCGGAGGCCATGTCGAAGGGCCAGGAGGTCCAGGTCACGCCCGAGAAGGTCCGCGAGATCATCAAGGTCTCGCAGGAGCCCGTGTCCCTCGAGACACCGATCGGCGAGGAGGAGGACTCCCACCTCGGCGACTTCATCGAGGACCGGGGGGCGCTCGCCCCGGCCGAGGCGGCGTCGCATCAGCTCCTCAAGGAGCAGGTCGAGGCGGTTCTCGACTCGCTGACCGGCCGCGAGCGGCGGGTCCTCCAGCTCCGCTTCGGCCTCGAGGACGGTCGCGCGCGAACGCTCGAGGAGGTCGGCAAGGAGTTCAACGTCACCCGTGAGCGCATTCGCCAGATCGAGGCGAAGGCCCTCCGCAAGCTGCGCCACCCGTCCCGCTCGCGCAAGCTCAAGGACTACCTGGAGTAA
PROTEIN sequence
Length: 350
TKELLKEAKKVVHTYNEKLDPDSFLALLDWAYFAVHNGDLDSRDNVGLQAIHTWSRDEVAYPALERWITSGKDAELMKRLGFDPEVPLNTKLAHRKGELVRIGRDAREQLTSANLRLVVSIAKKYIGRGMSFLDLIQEGNIGLIRAVEKFDYEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRLIRVSRQLLQELGREPTVEEIAEAMSKGQEVQVTPEKVREIIKVSQEPVSLETPIGEEEDSHLGDFIEDRGALAPAEAASHQLLKEQVEAVLDSLTGRERRVLQLRFGLEDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSRKLKDYLE*