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PLM2_30_coex_sep16_scaffold_5824_8

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(4834..6363)

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 492.0
  • Bit_score: 481
  • Evalue 7.30e-133
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 512.0
  • Bit_score: 330
  • Evalue 5.90e-88

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1530
TTGATCCTGTTCAGCGAAAACCCGGAGACCCAAGAAATCACCCCAGTGACGCCCGTCGTCGCGGCCGAGGAGCTCGAGCAGATCGAGCTCGAGACGGTCGTCGAGCCGATCGACGTCCCAAGCGCCAAGGCTGACGCGGACGCCGACGCCGCAGACGCGGCCCTCGACATCGAGGATTCAACGCGGCTGTACCTGCGCGAGATCGCGCGAGTACCGCTGCTCACCGCGGAGGAAGAGGTCGTCCTCGCCAAGGGGATCGAGCTCGGGCTCCGGATCCGGACCGAGCCGTGGACGGCCGTCCTCGACCTCCACGAGTGGACGCTCCACGAGACCGAGGCGACGACACGCGCCAAGAATCCGGTGCACGCCCTGCCATTTGGCGCAGAGGCTCACAGGATCGTGCGCAACGCCATCGCCGACGACTCGTCGGGCGACCTGCTCGTCACCGCGCCACGCTTCGGGTTCACCGGGGCCGCCGCCGAGGCCCAGGACGGCCCGGTGTCGGAGCTCCTCGAGCGAGCCCGGAACCTCCGCGCGGTCTACAACGAGCGGCTTGACGCAGAAGCGTTCATGACGCTTCTCGATTGGGTTCACGAGGTCGGCTCGCGACCGGCGTTCCGCGAAGAGCGAACTCTGGTGGCGATGCTCACCTGGGCCCGCGACGAGGTGGCCATCCCGGCCATCCGACGGTGGGTCGAGGCCGGCACCGACGTCGACGTGCTCGCGGAGCTCGGTTATCGGCCGGCCCAAGAAGGGGAGCCCGAGGGCGTCCTCGTCGAGATCGGCAAGAAGGCCCGGGATCACCTGACCTCGGCCAACCTTCGGCTGGTCGTGGCCAACGCCAAGAAGTACATGAACCGCGGACTCGGCTTCCTGGACCTCATCCAGGAGGGCAACGCGGGGCTCCTCCGTGCCGTCGACAAGTTCGAGTGGCAGCGCGGCTTCAAGTTCTCGACCTACGCGACCTGGTGGATTCGCCAGGCCATCCAGCGTGGGCTCGCGGACCAGTCGCGGACGATCCGCATCCCGGTCCACATGGTCGAGACCATGCAGCGCGTGACCCGGACGACGCGCGAGCTCACCGTTCAGCTCGGCCGCGAGCCGACGAACGAGGAGATCGCGACGACGCTGTCCGAGGATCCGCGCTGGGCGATCACCCCCGATCGGGTCGAGGAGGTCCGGCGCTACGGCCGCCTGCCGATCTCTCTCGAGACGCCGATCGGCGAGGAGGGCGACACCGAGCTCGGGAGCCTCATCGAGGATCCGAACGCGGTCTCGCCGCTGGACGCCGTGGCCGATCAGCTGCTGAAGGAGCAGCTGGCACGGGCACTCGACAGCCTCGACGGCCGCGAGGAGCACGTCCTCCGGCTCCGATTCGGCCTCGATGACGGGCGTCCGCGAACGCTCGAGGAGGTCGGGCACGAGTTCGGCCTCACGCGTGAGCGGATCCGGCAGATCGAGTCGCACGCATTGCGAAAGCTCCGCCACCCGTCCCGCAGCCGCAAGCTCCGGGAATACGTCTCGGAGTAA
PROTEIN sequence
Length: 510
LILFSENPETQEITPVTPVVAAEELEQIELETVVEPIDVPSAKADADADAADAALDIEDSTRLYLREIARVPLLTAEEEVVLAKGIELGLRIRTEPWTAVLDLHEWTLHETEATTRAKNPVHALPFGAEAHRIVRNAIADDSSGDLLVTAPRFGFTGAAAEAQDGPVSELLERARNLRAVYNERLDAEAFMTLLDWVHEVGSRPAFREERTLVAMLTWARDEVAIPAIRRWVEAGTDVDVLAELGYRPAQEGEPEGVLVEIGKKARDHLTSANLRLVVANAKKYMNRGLGFLDLIQEGNAGLLRAVDKFEWQRGFKFSTYATWWIRQAIQRGLADQSRTIRIPVHMVETMQRVTRTTRELTVQLGREPTNEEIATTLSEDPRWAITPDRVEEVRRYGRLPISLETPIGEEGDTELGSLIEDPNAVSPLDAVADQLLKEQLARALDSLDGREEHVLRLRFGLDDGRPRTLEEVGHEFGLTRERIRQIESHALRKLRHPSRSRKLREYVSE*