ggKbase home page

PLM2_30_coex_sep16_scaffold_8714_7

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 4712..8335

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 1224.0
  • Bit_score: 1531
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 1185.0
  • Bit_score: 895
  • Evalue 1.10e-257

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 3624
ATGACCGCGCCACCAGCTCGGGGCCGACGTGGCCGCGATCGGCACATCGCCGAGGCGGCGGCGACGGCGAAGACCGCCGGCGGCAAACGCGACGCAGGGCGCGGTGCCGGCCGGCGGCTGCCGGATCTCAGTGCGCTGCCACCGCTCCTCGCGGCGACCGGCTCCTTCGCCTCGCTCCGCGATCGGATCGGTGCACCCGGACGGCACGCTGGCCTGACGTCGGTTCCGCACGGCGCGAAGACGTACCTCGCCGCGGCACTCGCCCTGGTCGAGGGTGGCGAGCGCCTCGCCTGGATCGCCCGTGATGCGGAGATCGGTGACCGGGTCGCGGAAGAGCTCCAGGCGTGGCTGGGCGACGCGGCCGCGGTCGCAGTCCTCGAGCCACGGACCGCGCTGGCCTACGAGCGGAGCGAGCTCGTCGCCGACGAGACTGCCGCGCGCGTCGCGGCCCTGTCGGCCTGGCGGAGTGGCCGCGCGCGGATCCTCGTGGCGAGCGTCCAGGCACTTGTCCAGCACACGATTGCGCCGGACGATCTCCCGGCGACGCCGCGGGAACTCGTCGTCAACGGCCGGCTGCACCAGGACGAGCTGCTCCGCGACCTGCTCGACCTCGGCTACGCGCCCGCAGCGGAGGTCGCCGGCCGGGGCGAGTTCGCGCGGCGCGGCGGCATCGTCGACGTCTTCCCGCCGTCGGCTGCGCTTCCCGTCCGGATCGAATTCTTCGGCGACGAGATCGACTCCCTCCGCGCCTTCGACCCGACCGACCAGCGGGCGGTCGGGCCCCTGGAGGGAGTGACACTGCTCCCCGCATCGGAATTCCTTCGCAGCCCCGGTGGCCTCGCCCTCGACGAACGGCTCGGGCGCAAGGCGGCGAAGCTCCCAGAGCGCCTGGCCGCGGACCTCGAGCGGTTCGAGGCGAGCGAGACGTCGCGTGCGCTGAACGTGGGCGACGCGGCGGAGGTCTGGGCATCGCTCCTCGCGCCGGCGAGCGGCCTCGACCACGTCGCGCCCGACACCCTCCTGGTCCTCGACGAGCCGGGCGACATCGCGGAGGCGGCCGATTTCCTCTGGCGCCAGGCCGACGAGCGGCGGGCGGAGCTGATCGAAAGCGGCGACCTGCCGAAGGACTGGCCGTCGACCTACGTCGGCCCGCGGCCGTGGAAGTCCCGGCTGGTCGCCAGCCGGACCCTCGAGCTCACGTGGGAATCGGAGGCGCCGGAGTCGGGCGCCCTCGCCGCGCGTGGCCTCACGTCCGGTGACATGTTCGGCTGGCGTGAGCCGCAGCTCCCCGCCGGGAGGGGCAGCGCGATCGCCCAGGCCGTCGAGCGCTGGCAGGTCGACGGCGCGCGGATCGTCCTCGCCTCGGACCAGGCCCCGCGCCTCGCGGAACTGCTCGAGGAAGCGGGCCACCCCGCGGCGGTCGTCCAGGCCGTGGAGGCACCACCGCCCGGCGCGATCACACTGGTGGAGCGGAGCCTCAACGGCGGCTTCGAGGGCGGTCCCGACGGACTCGCCTTCGTCACGGATCGCGAGCTGTTCGGGACCGTCCGCGTCCGCCGGCCGAAGGCCATGCGCCGCGTCGTTCCGCGCGACATCCTCGAGCGCCTCGTCCCGGGCGATCTCGTCGTCCACATCGATCACGGTGTCGCCCGCTACGAGCGGATGCTCCGCCGCGGCAACAAGGGCGAGGGCGAGGATCGCGACTACCTCGAGCTGAGCTTCGCGTCCGCCGACAAGATCTTCGTCCCGGTCGAGCAGATCACCCGGATCTCGCGCTACAGCGGCGCTGAACGGCCCCAGTTATCCAAGCTGGGTGGCACGGAGTGGCTGCGGACGAAGCAGCGCGTCCGAAAGGCCGTCACGGACCTCGCCGACGAGCTGCTGGAGCTCTACGCCTCCCGGACCCGCGTCCCGGGCCACGCCTTCAGCCCCGACACGCCCTGGCAGGCCGAGATGGAGGCGTCGTTTCCGTACGAGGAGACGCCTGACCAACTCCGCGCCTCGGTCGAGGTCAAGGCCGACATGGAGGTCGGGCGGCCGATGGACCGGCTCGTCGTCGGCGACGTCGGCTACGGCAAGACCGAGGTCGCCCTGCGGGCGGCGTTCAAGGCGATCCAGGACGGTCGCCAGGTCGCGGTCCTCGTCCCGACGACGGTCCTGGCCGCCCAGCACCACCAGACGTTTTCGCAGCGCTTCGCGACCTTCCCGATCGAGGTGCGGCTGCTGTCGCGGTTCGTCGGTCCTGCTGAACAGAAGCGAACGCTCGCCGGGCTCGAGGGCGGGTCGGTCGATCTCGTGATCGGTACGCACCGCCTCCTGTCGAAGGACGTGAAGTTCAAGGACCTGGGCCTCGTCGTCGTCGACGAGGAGCAGCGGTTCGGGGTCGCGGCCAAGGAACGGCTGAAGCAGCTACGTCGTGAGGTCGATGTTCTGACCCTCTCGGCGACGCCGATCCCGCGGACGCTGAACCTTGCCCTCGCCGGGGTCCGCGACATGTCCGTCATCGAGACCCCGCCGGAGGATCGGCTGCCGATCCAGACCCGGGTCGCCGAAGCCTCGGCCGGGCTCGTCCGCGACGCGATCCTGCGGGAACTCGACCGCGGCGGCCAGGTGTTCTTCGTCCACAACCGGGTCGAAACGATCGAAGCGCAGACCGAGCAGTTGCGGCGGCTGCTGCCGGGCGCGCGGTTCGTCGTCGGCCACGGCCAGATGCCCGAAGGCTCCCTCGAGAAGGTGATGCTCACATTCGCATCAGGCGAAGCGGATGTCCTCGTCTGCACGACGATCATCGAGTCGGGCCTCGACATCCCGAACGCCAACACGATCGTCATCGATCGCGCCGACACGCTGGGGTTGGCCCAGCTCTACCAGCTCCGGGGGCGTGTCGGGCGGTCGTCGCGGCGGGCGTACGCCTACCTCCTCTACCGACGGCGCGAGCGGATGAGCGAGGAGGCTCGGAAGCGGCTCCAGGCGATCTTCAACGCGTCGGAGCTGGGTGCCGGCTTCCAGATCGCGCTGGCCGACCTCGAGATCCGCGGCGCGGGCAACATCCTCGGCGGGGAGCAGTCGGGGCACATGGCGGCGGTTGGGTTCGACCTCTACTCGCGCTTGCTCGCGGAGGCTGTCGAGGAGCGCAAGGCGCGGCGAGAGGATCGGCCGCCGCGGGTCGACAAGCCCCAGGCCGTCGTCGACCTGCCGGTCGAGGCCCACCTGCCCGATTCCTATGTGCCCGAGGAGGCCCAGAAGCTCGAGCTCTACCGACGCCTGGCCCGGGCTCGATCTTCGGGGGACCTGGCGGCCTTCCGCCAGGAGGTCACCGATCGGTTCGGCCCGATGCCGCAGCCGGTCGTGCGGCTCGTCGAGGTTCAAGAGCTGCGGATGGCGGCGGAGACTGCAGGCGTCGCTTCGATATCGCGCGAGGAGGGCCAGCTGGTCGTCCGGTTCGGGGAGGGGATGACTCGCGCGACGGCGATGCGGCTGCTCGCCGGCGGGGGACTGCCGGGCGTCAAGCCGTCCGACGTGACGTTCGCCTCGAACCAGGTCCGCATCCGCCTGCCGCGCGACCCGTCCCGAGCCTGGGGCCTGACGCAGGCCGTCGTGGCTCGTCTGTCGGCCGCCGAGTAG
PROTEIN sequence
Length: 1208
MTAPPARGRRGRDRHIAEAAATAKTAGGKRDAGRGAGRRLPDLSALPPLLAATGSFASLRDRIGAPGRHAGLTSVPHGAKTYLAAALALVEGGERLAWIARDAEIGDRVAEELQAWLGDAAAVAVLEPRTALAYERSELVADETAARVAALSAWRSGRARILVASVQALVQHTIAPDDLPATPRELVVNGRLHQDELLRDLLDLGYAPAAEVAGRGEFARRGGIVDVFPPSAALPVRIEFFGDEIDSLRAFDPTDQRAVGPLEGVTLLPASEFLRSPGGLALDERLGRKAAKLPERLAADLERFEASETSRALNVGDAAEVWASLLAPASGLDHVAPDTLLVLDEPGDIAEAADFLWRQADERRAELIESGDLPKDWPSTYVGPRPWKSRLVASRTLELTWESEAPESGALAARGLTSGDMFGWREPQLPAGRGSAIAQAVERWQVDGARIVLASDQAPRLAELLEEAGHPAAVVQAVEAPPPGAITLVERSLNGGFEGGPDGLAFVTDRELFGTVRVRRPKAMRRVVPRDILERLVPGDLVVHIDHGVARYERMLRRGNKGEGEDRDYLELSFASADKIFVPVEQITRISRYSGAERPQLSKLGGTEWLRTKQRVRKAVTDLADELLELYASRTRVPGHAFSPDTPWQAEMEASFPYEETPDQLRASVEVKADMEVGRPMDRLVVGDVGYGKTEVALRAAFKAIQDGRQVAVLVPTTVLAAQHHQTFSQRFATFPIEVRLLSRFVGPAEQKRTLAGLEGGSVDLVIGTHRLLSKDVKFKDLGLVVVDEEQRFGVAAKERLKQLRREVDVLTLSATPIPRTLNLALAGVRDMSVIETPPEDRLPIQTRVAEASAGLVRDAILRELDRGGQVFFVHNRVETIEAQTEQLRRLLPGARFVVGHGQMPEGSLEKVMLTFASGEADVLVCTTIIESGLDIPNANTIVIDRADTLGLAQLYQLRGRVGRSSRRAYAYLLYRRRERMSEEARKRLQAIFNASELGAGFQIALADLEIRGAGNILGGEQSGHMAAVGFDLYSRLLAEAVEERKARREDRPPRVDKPQAVVDLPVEAHLPDSYVPEEAQKLELYRRLARARSSGDLAAFRQEVTDRFGPMPQPVVRLVEVQELRMAAETAGVASISREEGQLVVRFGEGMTRATAMRLLAGGGLPGVKPSDVTFASNQVRIRLPRDPSRAWGLTQAVVARLSAAE*