ggKbase home page

PLM2_30_coex_sep16_scaffold_3461_4

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: comp(2975..4171)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07KQ7_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 405.0
  • Bit_score: 664
  • Evalue 6.20e-188
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 405.0
  • Bit_score: 664
  • Evalue 1.80e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAGCCGCCGCGTCAAAAAACCTCTCCGCCCGGCGGGCGATCGCCCGAAGGGCGCGCGCCCCTATCGGGGCTCGCCGGCCGAGCGGCCGCAGTCGTATCGCCCGGGCGGCAAACCCCCGGCGCGGTTTCCGGCTGCGCCGCCCCGTGCGGCAAAGCCTTTTGTGCCTGAGCCGGAGAAGGTGCTGCCCGAGCCGCCGCCGCTGCCGACCAAGGTCCAGACCGTCGTCGTCACCGCCGACGAGAACAACATGCGCGTCGACCGTTTCCTCGAGGCGCGCTTTCCGGGGCTTTCGTTCTCCCACATCCAGCGCATCGTTCGCAAAGGCGAGCTGCGCGTCAACGGCAAGCGCGCCGACAGCAAGGACCGGATCGAGGAGGGGCAGAGCATTCGCATTCCGCCGCTCAAGCTCGATACGCCGAAAGGCGCGGGAAATCTCTCGGAAGCCGCGACCAAGACGCTGCAAGCCCTCAAGGACATGATCCTCTATGAGGACGCGGATGTGATGGTGCTGAACAAGCCCGCGGGGCTGGCCGTGCAGGGCGGCTCCGGCATCACGCGAAATGTCGACGACATGCTGGAAGTGATGCGCGACGCCAAGGGGCAGAAGCCGCGGCTGGTGCACCGGCTGGACCGGGAAACATCGGGCTGTCTCTTGATCGCAAAAACCCGCTTTGCCGCCACCGCTCTGACCGGCTCGTTCCGCCATCGCTCGGCGCGCAAAATCTACTGGGCGCTGGTGGCCGGCGTGCCGAAGCCGAAGCAGGGCCGCATCTCGACCTACCTCGCCAAGGAGGAGAGCGAGGACGACAGCATCATGCGGGTGGCAAAACACGGCGACGAGGGCGCGAGCCACGCGGTGACCTACTATGCCGTGGTCGAGACCTCCGCCCAAAAACTCGCCTGGGTATCGCTGAAGCCGGTCACCGGGCGAACCCATCAATTGCGCGCCCATATGGCGCATATCGACCACGCCATCGTCGGCGATCCCAAATATTTCAACAAGGAGAACTGGCAGCTGCCGGGCGGCCTGCAGAACCGGCTGCATCTCCTGGCGCGGCGGATCGTGATCCCGCATCCGCGCGGCGGCGTGATCGACGCCAGCGCGCCGCTGCCGCCGCACATGCTGCAATCCTGGAATCTGCTCGGGCTTGAGCACGACCGGTTCGATCCGATCGAGAACGCGCCGGAGGAATAG
PROTEIN sequence
Length: 399
MSRRVKKPLRPAGDRPKGARPYRGSPAERPQSYRPGGKPPARFPAAPPRAAKPFVPEPEKVLPEPPPLPTKVQTVVVTADENNMRVDRFLEARFPGLSFSHIQRIVRKGELRVNGKRADSKDRIEEGQSIRIPPLKLDTPKGAGNLSEAATKTLQALKDMILYEDADVMVLNKPAGLAVQGGSGITRNVDDMLEVMRDAKGQKPRLVHRLDRETSGCLLIAKTRFAATALTGSFRHRSARKIYWALVAGVPKPKQGRISTYLAKEESEDDSIMRVAKHGDEGASHAVTYYAVVETSAQKLAWVSLKPVTGRTHQLRAHMAHIDHAIVGDPKYFNKENWQLPGGLQNRLHLLARRIVIPHPRGGVIDASAPLPPHMLQSWNLLGLEHDRFDPIENAPEE*