ggKbase home page

PLM2_30_coex_sep16_scaffold_7550_3

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: comp(2025..3623)

Top 3 Functional Annotations

Value Algorithm Source
Putative Omp2b porin Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213J7_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 547.0
  • Bit_score: 534
  • Evalue 7.60e-149
putative Omp2b porin similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 547.0
  • Bit_score: 534
  • Evalue 2.20e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGATTACGGCGCGAACACTTATTCTCGGCTCGGCGGCAGGTTTGATCGCCGTGAGCGGAGCTCAAGCGGCCGACCTTCCGGTCAAGGCCAAGGCAGTCGAATATGTGAGGATCTGTTCGCTTTACGGCGCCGGCTTCTTCTACATCCCGGGCACCGACACCTGCATCAAGATCGGCGGCTATCTGCGCGCCGACACCACCTTCAACGGCGGCGCCCACGGCGCGCCGGCCTGGAATAGCGACCTGGGCCAGCAAAACCGCTACCGTGACTACTTCGTTTCCCGTTCGCGTATGGCGCTGACGGTCGATACCCGCACCGCGACCGAGTACGGTGTGGTTCGCACCTTCGGCCAGGGTGACTTCCAGTTCACCAATCTCGGCGGCAGCAGCCGCAACCCAAATCTCCAGGCCACGAACCTCGGCAACAACCCGCAGCTACTTGACACCGCCGGCAATGGCTACGTCGCGGTCGAATATCTCTTCATACAGTTCGCCGGCTTCACCTTCGGTAAGTCTTCTTCGGCTTATTCGACGCCCTGGAACGGTTTCCCGGGCAACATCAACTCGAGCCTGCTCGGCGGCAACAACACCGACACCGGCGTCAATAACATCCAGTACACCGCCGAGTTCGGCAATGGCGTATCGGCCTCGATCGGTCTCGACGACCCGACCGTGTGGGACCGCACGGCCGTCTACAATCTGGGCATCCCGTCGGCGATCGGCGTCAACGGAACGGGATCGAACGCCTATGCCGGCGTGCACGCGCCCGACATCGTCGGCAGAATCCGGGTCGATCAGGCCTGGGGCTTGTTCCAGCTTTCGGCGGCCGCGCACGAGGTCAACGCGTCGTACAATACGCTGGGCGCCGGCGGCGTCCCGAATGCGCTTTCTGAAATCAGCGGTCACCCCGAAACCAAGTGGGGCGGCTCGGTTATGGCGGCGTTGAACATCAAGAACCTGCCGACCGGCGCCGGCGACGACATCAAGTTCGATGTCTCCTATGCCAAGGGCCTGACCAAGAACGTGATCGCCACCAGCGGCGGCTCGCCGAGCTTTGCGATGTTTGGCGACAGCGGCTCCGCCTATCAGAGCGTCGGCTTCGGCGCGACCACCGACGGCGTCTACATGCCCGGCGCAGGTGGTACCGGCGGCATCGTCCTGACGACGGCCTGGGGCGTCCGCGGCGCGTTCAATCACAACTGGAATCCGAACTGGTCGACCAGCCTGTTCGGCAGCTACTCGGCCGTCAGGTATGACGGTGGCGCCAACGACAATCTGCTTGGTGCTGGAACCACGACGGCCAAGGGCGCTTACTGCGCTGCCTTCGCCGCCAGCCACCCGGGTCAGGCGCTGGCCGGGAATGCCGCAGGTGCCTACACCTGTAACCCCGACTTCAACGTCTCGCAGCTCGGCGTCGTTACCCGCTGGACCCCGGTCAAGAACCTGACGTTCTCGGGCGAAGTCCAGTGGTTCCATCTCGACCAGAAGATGTCGGGCTCTTCGGTATTCACGGCGACCGCTCCGAAGCCTACCGCGCTTTACGAGTTCAAGGATCAGAACACGGTCCTGCTCCAGCTCCGCGCCCAGCGTAACTTCTGA
PROTEIN sequence
Length: 533
MITARTLILGSAAGLIAVSGAQAADLPVKAKAVEYVRICSLYGAGFFYIPGTDTCIKIGGYLRADTTFNGGAHGAPAWNSDLGQQNRYRDYFVSRSRMALTVDTRTATEYGVVRTFGQGDFQFTNLGGSSRNPNLQATNLGNNPQLLDTAGNGYVAVEYLFIQFAGFTFGKSSSAYSTPWNGFPGNINSSLLGGNNTDTGVNNIQYTAEFGNGVSASIGLDDPTVWDRTAVYNLGIPSAIGVNGTGSNAYAGVHAPDIVGRIRVDQAWGLFQLSAAAHEVNASYNTLGAGGVPNALSEISGHPETKWGGSVMAALNIKNLPTGAGDDIKFDVSYAKGLTKNVIATSGGSPSFAMFGDSGSAYQSVGFGATTDGVYMPGAGGTGGIVLTTAWGVRGAFNHNWNPNWSTSLFGSYSAVRYDGGANDNLLGAGTTTAKGAYCAAFAASHPGQALAGNAAGAYTCNPDFNVSQLGVVTRWTPVKNLTFSGEVQWFHLDQKMSGSSVFTATAPKPTALYEFKDQNTVLLQLRAQRNF*