ggKbase home page

PLM2_30_coex_sep16_scaffold_9414_2

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: 1317..2069

Top 3 Functional Annotations

Value Algorithm Source
Pilus (Caulobacter type) biogenesis lipoprotein CpaD Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ILX4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 245.0
  • Bit_score: 368
  • Evalue 3.40e-99
putative pilus assembly protein CpaD similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 242.0
  • Bit_score: 344
  • Evalue 1.90e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGACACCGAAGATGAAACCAAAGAAGTCCGCCGATCCCAGGCGCGCCGTTTGCCTGGCGGGAGCGCTGATCGGTCTTGCCGTGGCGCTCGGCGCCTGCAAGCACAATACCGATGTCGCGACGACGGCGGGCGTGCCCGACGACTATCGCCTGCGCCATCCGATCGCGGTCCAGGAAACCGACCGCTCGATCGTCGTTTTCGTCGGCCGCGGCCGCGGCGGCCTCTCCGCCTCCCAGCGCGCCGACGTGATGTATCTGGGCCAGACCTGGATGCGGGAAGGCACCGGCGTCATCAGCATCGACGTGCCCGTCAACACGCCGAACGCGCGGGCGGCCGAAGACTCATTGCGCGAGATCCAGGCGACGCTTGCTGCCGCCGGCGTGCCGCCGCGCGCAACCAATGTCCGCCAGTATCGCCCCGAAGATCCCAGGCATATGGCCGCGATCCGCCTCAACTATCCGAAGATTTCAGCGGTGGCCGGTCCGTGCGGGCTGTGGCCGGAGGATCTCGGGCCGTCCGTCAACAACAAGGGCTATTTCGAAAACAAGTCCTACTACAATTTCGGTTGCTCCAATCAGCGCAACCTGGCGGCGATGGTCGACAATCCGTCGGACCTCGTGCAGCCGCGTCCCGAAACCCCAGCCTACGCGCCGCGCCGTGGTACGGCCTTCGAAAAATATCGCAAAGGCATTTCCACCACGACCACCTATCCCGAGGCCGACAGGGCCAAACTCAGCGATACCGGCAAATGA
PROTEIN sequence
Length: 251
MTPKMKPKKSADPRRAVCLAGALIGLAVALGACKHNTDVATTAGVPDDYRLRHPIAVQETDRSIVVFVGRGRGGLSASQRADVMYLGQTWMREGTGVISIDVPVNTPNARAAEDSLREIQATLAAAGVPPRATNVRQYRPEDPRHMAAIRLNYPKISAVAGPCGLWPEDLGPSVNNKGYFENKSYYNFGCSNQRNLAAMVDNPSDLVQPRPETPAYAPRRGTAFEKYRKGISTTTTYPEADRAKLSDTGK*