ggKbase home page

PLM2_30_coex_sep16_scaffold_15134_5

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: comp(3727..4392)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GWZ9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 221.0
  • Bit_score: 331
  • Evalue 4.10e-88
esterase similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 221.0
  • Bit_score: 324
  • Evalue 1.40e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTTTGCGCACATACGCGTGTTGATTGTGGCTTTGATGACGACCGGGCCGGTTTTGGCCCAAGCCCAAGCTCAAGCCCCGGCGACCGCGTCCGCCAAACCGGTCAAAATGGTCGTCCTCGGCGATTCCTTAAGCGCCGGCCTTGGCCTTTCGGCCTCGACGGCGTTTCCGGCGCGGTTGCAAAAAGCCTTGGATAGCAAAGGGATAAAGGTCGACATGATCAACGCCGGGGTGTCCGGCGACACCTCTTCCGGGGGCCGCGACCGGCTGGACTGGTCGATCCCCGAGGGAACCGAGGCGGTCATCCTCGAACTTGGCGCCAACGACGCCCTGCGCGGGACCGACCCCGCCGTCACCCGCGCCGCGCTGAGCGATATCTTGACGCAGCTGAAGGCGCGCAAGATTGCCGTGCTGATGTGCGGAATGCTCGCCCCGCCCAATTATGGCCGCGAATATGCTGCCCGCTTCAACGCGATCTATCCGGAGCTTTCCAAATCCTTCGGCGTGCCGCTCTATCCGTTCTTCCTGGAGGGGGTGGCCGCCGACGCCAAGCTCAACCAGCCCGACGGGCTGCATCCGACCGCGGAGGGCATCGATGTCATCGTGAAGAATATTCTGCCTATGGTGGAGGCATTTCTCGGCACGATCTCCGGGCAGCGCAGTTGA
PROTEIN sequence
Length: 222
MFAHIRVLIVALMTTGPVLAQAQAQAPATASAKPVKMVVLGDSLSAGLGLSASTAFPARLQKALDSKGIKVDMINAGVSGDTSSGGRDRLDWSIPEGTEAVILELGANDALRGTDPAVTRAALSDILTQLKARKIAVLMCGMLAPPNYGREYAARFNAIYPELSKSFGVPLYPFFLEGVAADAKLNQPDGLHPTAEGIDVIVKNILPMVEAFLGTISGQRS*