ggKbase home page

PLM2_30_coex_sep16_scaffold_30504_1

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: comp(2..1813)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6F3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 584.0
  • Bit_score: 891
  • Evalue 2.80e-256
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 516.0
  • Bit_score: 689
  • Evalue 4.50e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
ATGCGCGGGAAGGCATTTCGGGTGGACGACATCGACCGCGGCCAGCAAATGTCGGGCGATTCTGCCGGCCCTGCCGAAAGGGCCGGAACGGTCACGCGGCTTGCGGCATGCTGTGTGCTGCTCGCGACGGCCGTCGTCGGCGACATCGCGACCTCGGGATGGAGTCTTCGCGAACGCGTCCTGCTGGCGCTCGTCGCCGTTCTGGCGGTAGCCGCCGGATTGCTGCTGCGGCGTCACCGATTGACCGACCGGCGGCTGGCGGCCGAGCGGCGCCAGCTCTCGATTGCCGTGAACAATATCCCACAAGGCCTTGTTCTGTATGATGCATCCGCGCGGATCATCATTTGCAACCAGCCCTATCTCGACATGTTCGGACTGTCGCCTGACGTCGCCAAGCCCGGCTGCACGATGCAGCGGCTGATCGCTCACCGGAAGGAAACCGGATCATTCGATGGCGACGTCGACGAATTCTGCAACGCGATCATCCACAAAGTGTCGCTCGGCAAGGCGACGCGGCAGCTTTCCGAAGCGCCGGGTGGCCGGGCGATCGAGATCATCAACCGGCCGCTGAAGAGCGGCGGATGGGTCGCGACCATCGAGGACATCACCGAGCGCCGGCGCGCGGACGAGAAGATCGCGCATCTGGCGCATTACGACGGGTTGACCGACCTGCCGAACCGGATCCTGTTCCGCGAGCGGCTGGAACAGTCGCTCAAGGCGATACAGCCGGGCGAGCAACTGGCCGTGCTCTATATCGACATCGACGAGTTCAAGAGCGTCAACGACGCGCTCGGCCATCCGGTCGGCGATGAGCTGCTCAAGGGGGTCGCGGAGCATCTGCGCGGTTGTCTTGAAGAGGGCGATGTGGCGGCCCGGCTCGGCGGCGACGAGTTCGCCATCATTCAGACCGCTATCAAGGACCGGTCGGAAACCACGCGGCTGGTTGATGAAATCCATTCGGCGATCAGGCAGCCCCTTGAATGCATGGGGCATCTGATCACCACCGATGCCAGCATCGGCATAGCGCTGGCCCCCCGCGACGGGGTGGACCTCGACCAATTGTTGAAGAATGCGGACCTTGCGCTCTACGGGGCCAAGGCTGACGGACGGCGGACCTACCGCTTCTTCGAGGCCGGCATGGATCAGCGCGCCAGGGCGCGGCGAAGCCTGGAGCTGGAGCTGCGTCAGGCGATCAGCGACGGCAGCCTCGAGACCTACTATCAGCCCGTGGTCAATATCGAGGACGACAAGATCTCATCCTGCGAAGCGCTGCTGCGATGGCGGCACCCCGAACGCGGCATGATTTCGCCGGCGGAATTCATCCCGATTGCGGAGGACAGCGGCCTGATCAATCAGCTCGGCCTGTGGGTGCTCAATACCGCCTGTGCCGAGGCCACCACCTGGCCGGATCATGTTCGCGTCGCGGTCAACGTTTCGCCGGTGCAGTTCAGGAGCCCGTCGCTGGCGTTGAACGTGGCGGCGGCGCTCGCGGCTTGCAATCTTCCCGCCAGCAGGCTGGAACTCGAGATCACCGAGGCCGTGCTCATTCGCGACGACGAGGCGGCGCTCGACATGCTGCACCAGTTGCGCAAGCTCGGTGTCCGGATCGCGCTGGACGATTTCGGCACCGGCTATTCGTCGCTCAGCTACCTGCAGCGTTTTCCGTTCGACAAGATCAAGATCGATCGCACCTTCATCAAGGATATCGCCGGTCCCGGCGCGTCCTCGTCCATCGTCCAGGCGGTGGTGAACATCGCAGCCGCCAGCGACATGACGACGACGGCTGAGGGTGTCGAAACCGAGCAGCAGCGG
PROTEIN sequence
Length: 604
MRGKAFRVDDIDRGQQMSGDSAGPAERAGTVTRLAACCVLLATAVVGDIATSGWSLRERVLLALVAVLAVAAGLLLRRHRLTDRRLAAERRQLSIAVNNIPQGLVLYDASARIIICNQPYLDMFGLSPDVAKPGCTMQRLIAHRKETGSFDGDVDEFCNAIIHKVSLGKATRQLSEAPGGRAIEIINRPLKSGGWVATIEDITERRRADEKIAHLAHYDGLTDLPNRILFRERLEQSLKAIQPGEQLAVLYIDIDEFKSVNDALGHPVGDELLKGVAEHLRGCLEEGDVAARLGGDEFAIIQTAIKDRSETTRLVDEIHSAIRQPLECMGHLITTDASIGIALAPRDGVDLDQLLKNADLALYGAKADGRRTYRFFEAGMDQRARARRSLELELRQAISDGSLETYYQPVVNIEDDKISSCEALLRWRHPERGMISPAEFIPIAEDSGLINQLGLWVLNTACAEATTWPDHVRVAVNVSPVQFRSPSLALNVAAALAACNLPASRLELEITEAVLIRDDEAALDMLHQLRKLGVRIALDDFGTGYSSLSYLQRFPFDKIKIDRTFIKDIAGPGASSSIVQAVVNIAAASDMTTTAEGVETEQQR