ggKbase home page

PLM2_30_coex_sep16_scaffold_40427_2

Organism: PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

near complete RP 43 / 55 MC: 8 BSCG 44 / 51 MC: 1 ASCG 7 / 38
Location: 590..1201

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H705_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 203.0
  • Bit_score: 346
  • Evalue 1.10e-92
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 203.0
  • Bit_score: 332
  • Evalue 8.10e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGTCGAACGTCATCGCCATCAACGCCGCAGCCAAGCAGTCGATTGCCGCCGCTCGCGCGATATCAGACGAAATGCTGCTGCAGAGTATTGCCAAGGGCGACCGCACGTCGATGCATGTGCTTTATTCCCGCCATAACGTCCGGGTTTACCGCTTCGTGCTGCGCATGGTGCGCGACACCACCATGGCGGAAGACCTCGTCAGCCAGGTGTTCCTCGACGTGTGGCGGACCGCCAGCCAGTTCGAGGGCCGCTCGCAGGTTTCGACCTGGCTGCTGTCGATTGCCCGCTTCAAGGCGCTGACCGCGCTGCGCCAGCGCAAGCATGAGGACATCGAGCAGGAAGACGTGCTGGAGATCGCCGATGACGCCGATACCCCGGAAGCCTCGCTCGACCGCAGCAACACCAGCGCCATCCTGCGCGCCTGCGTCGCCAAGCTGTCGCCGGCGCATCGCGAGATCATCAACCTGGTCTACTACCACGAGAAGTCGGTGGAAGAGGCCGGCGCAATCATCGGTATTCCCCAGAGCACGGTGAAGACCCGGATGTTCTACGCCCGCAAACAATTGGCCGAGTTGCTTAAGGGCGCCGGCGTGGACAGCATTGCTGCATAA
PROTEIN sequence
Length: 204
MSNVIAINAAAKQSIAAARAISDEMLLQSIAKGDRTSMHVLYSRHNVRVYRFVLRMVRDTTMAEDLVSQVFLDVWRTASQFEGRSQVSTWLLSIARFKALTALRQRKHEDIEQEDVLEIADDADTPEASLDRSNTSAILRACVAKLSPAHREIINLVYYHEKSVEEAGAIIGIPQSTVKTRMFYARKQLAELLKGAGVDSIAA*