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PLM2_30_coex_sep16_Alphaproteobacteria_Rhizobiales_63_15

PLM2_30cm_coex_sep2016_Bradyrhizobium_63_15
In projects: PLM2_30cm_coex_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bradyrhizobium  →  Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

from PLM2_30_coex_sep16_metabat_bin_11

Displaying items 701-750 of 1013 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM2_30_coex_sep16_scaffold_9375
Genus: Bradyrhizobium (85.71%)
7 5889 bp 66.55 15.38 83.70
PLM2_30_coex_sep16_scaffold_28988
Species: Bradyrhizobium elkanii (66.67%)
3 3299 bp 60.87 15.82 83.66
PLM2_30_coex_sep16_scaffold_4898
Genus: Bradyrhizobium (75%)
8 8115 bp 64.40 12.72 83.51
PLM2_30_coex_sep16_scaffold_43384
Genus: Bradyrhizobium (100%)
5 2663 bp 63.05 13.52 83.48
PLM2_30_coex_sep16_scaffold_40451
Species: Bradyrhizobium sp. DFCI-1 (50%)
4 2764 bp 62.95 12.59 83.47
PLM2_30_coex_sep16_scaffold_46274
Species: Bradyrhizobium sp. S23321 (66.67%)
3 2575 bp 62.41 11.77 83.42
PLM2_30_coex_sep16_scaffold_7550
Order: Rhizobiales (66.67%)
6 6594 bp 60.33 12.24 83.39
PLM2_30_coex_sep16_scaffold_21918
Genus: Bradyrhizobium (50%)
4 3817 bp 60.75 13.05 83.39
PLM2_30_coex_sep16_scaffold_17068
Species: Bradyrhizobium elkanii (66.67%)
6 5710 bp 63.63 19.99 83.38
PLM2_30_coex_sep16_scaffold_36801
Species: Bradyrhizobium elkanii (100%)
3 2908 bp 63.24 13.31 83.36
PLM2_30_coex_sep16_scaffold_26450
Species: Bradyrhizobium sp. DFCI-1 (60%)
5 4694 bp 62.68 13.29 83.34
PLM2_30_coex_sep16_scaffold_18319
Genus: Bradyrhizobium (66.67%)
3 4184 bp 63.60 12.48 83.32
PLM2_30_coex_sep16_scaffold_45662
Genus: Bradyrhizobium (75%)
4 2593 bp 64.33 12.55 83.30
PLM2_30_coex_sep16_scaffold_29725
Genus: Bradyrhizobium (66.67%)
6 3258 bp 62.95 16.85 83.24
PLM2_30_coex_sep16_scaffold_36677
Species: Bradyrhizobium elkanii (50%)
4 2913 bp 62.20 13.54 83.21
PLM2_30_coex_sep16_scaffold_13209
Order: Rhizobiales (83.33%)
6 4955 bp 62.08 11.69 83.15
PLM2_30_coex_sep16_scaffold_38736
Genus: Bradyrhizobium (60%)
5 2829 bp 62.21 16.76 83.14
PLM2_30_coex_sep16_scaffold_19077
Species: Bradyrhizobium elkanii (50%)
4 4100 bp 63.46 18.15 83.12
PLM2_30_coex_sep16_scaffold_17211
Species: Bradyrhizobium japonicum (57.14%)
7 4318 bp 63.39 12.16 83.09
PLM2_30_coex_sep16_scaffold_4537
Genus: Bradyrhizobium (70%)
10 8423 bp 64.54 18.75 83.06
PLM2_30_coex_sep16_scaffold_6964
Genus: Bradyrhizobium (57.14%)
7 6858 bp 62.53 12.27 83.03
PLM2_30_coex_sep16_scaffold_22836
Genus: Bradyrhizobium (100%)
5 3740 bp 62.38 15.12 83.02
PLM2_30_coex_sep16_scaffold_31868
Order: Rhizobiales (83.33%)
6 3137 bp 63.56 14.58 83.01
PLM2_30_coex_sep16_scaffold_12248
Genus: Bradyrhizobium (83.33%)
6 5151 bp 62.82 14.50 82.99
PLM2_30_coex_sep16_scaffold_26490
Genus: Bradyrhizobium (100%)
4 3460 bp 64.57 12.75 82.98
PLM2_30_coex_sep16_scaffold_40301
Species: Bradyrhizobium japonicum (50%)
2 2770 bp 62.78 7.69 82.96
PLM2_30_coex_sep16_scaffold_5641
Genus: Bradyrhizobium (54.55%)
11 7585 bp 62.93 18.06 82.94
PLM2_30_coex_sep16_scaffold_19356
Genus: Bradyrhizobium (60%)
5 5234 bp 62.55 16.19 82.94
PLM2_30_coex_sep16_scaffold_44958
Order: Rhizobiales (50%)
4 2612 bp 63.21 14.76 82.93
PLM2_30_coex_sep16_scaffold_28434
Species: Bradyrhizobium elkanii (50%)
4 3334 bp 65.60 16.20 82.87
PLM2_30_coex_sep16_scaffold_40097
Species: Bradyrhizobium elkanii (66.67%)
3 2778 bp 60.55 12.10 82.83
PLM2_30_coex_sep16_scaffold_18348
Genus: Bradyrhizobium (80%)
5 4180 bp 64.52 14.71 82.82
PLM2_30_coex_sep16_scaffold_19105
Genus: Bradyrhizobium (100%)
3 4097 bp 64.93 15.82 82.82
PLM2_30_coex_sep16_scaffold_15134
Species: Bradyrhizobium sp. DFCI-1 (50%)
6 4623 bp 62.34 19.01 82.74
PLM2_30_coex_sep16_scaffold_20057
Genus: Bradyrhizobium (60%)
5 3993 bp 64.79 11.68 82.64
PLM2_30_coex_sep16_scaffold_29021
Genus: Bradyrhizobium (57.14%)
7 3297 bp 62.88 15.92 82.62
PLM2_30_coex_sep16_scaffold_8663
Class: Alphaproteobacteria (88.89%)
9 6134 bp 62.57 13.40 82.61
PLM2_30_coex_sep16_scaffold_32825
Genus: Bradyrhizobium (66.67%)
3 3088 bp 57.32 15.01 82.58
PLM2_30_coex_sep16_scaffold_16093
Species: Bradyrhizobium sp. S23321 (60%)
5 4473 bp 63.69 13.28 82.56
PLM2_30_coex_sep16_scaffold_25847
Species: Bradyrhizobium japonicum (50%)
6 3505 bp 64.62 15.66 82.51
PLM2_30_coex_sep16_scaffold_10042
Genus: Bradyrhizobium (80%)
5 5687 bp 61.70 12.11 82.50
PLM2_30_coex_sep16_scaffold_37070
Genus: Bradyrhizobium (100%)
4 2895 bp 63.52 18.81 82.49
PLM2_30_coex_sep16_scaffold_28535
Species: Bradyrhizobium japonicum (66.67%)
3 3327 bp 60.14 14.29 82.42
PLM2_30_coex_sep16_scaffold_19994
Genus: Bradyrhizobium (60%)
5 3999 bp 63.17 18.42 82.37
PLM2_30_coex_sep16_scaffold_28151
Species: Bradyrhizobium sp. DFCI-1 (57.14%)
7 6173 bp 63.41 17.03 82.33
PLM2_30_coex_sep16_scaffold_43450
Species: Bradyrhizobium elkanii (66.67%)
3 2661 bp 63.28 13.08 82.30
PLM2_30_coex_sep16_scaffold_21886
Order: Rhizobiales (66.67%)
6 3821 bp 60.69 15.70 82.28
PLM2_30_coex_sep16_scaffold_17696
Genus: Bradyrhizobium (50%)
4 4260 bp 60.31 13.56 82.25
PLM2_30_coex_sep16_scaffold_19129
Species: Bradyrhizobium sp. (50%)
4 4562 bp 62.56 17.69 82.20
PLM2_30_coex_sep16_scaffold_31981
Genus: Bradyrhizobium (100%)
5 3132 bp 63.83 15.04 82.18
Displaying items 701-750 of 1013 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.