ggKbase home page

PLM2_5_b1_sep16_scaffold_1063_7

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 8431..9030

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4EE98 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 185.0
  • Bit_score: 139
  • Evalue 2.70e-30
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 195.0
  • Bit_score: 136
  • Evalue 6.40e-30
Tax=RBG_16_Acidobacteria_70_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 185.0
  • Bit_score: 137
  • Evalue 1.10e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_70_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 600
GTGACCCAGCCAAAACGTCTTAGTCAAGAGGACGAACGCACCCTGGTTCGGCGCCTCAAGGAGCGCGACGAGCGCGCCCTGGCCGAGCTGTATGACGCCATGGCGCCGTGGGTGCTCGGCCTCGCGACTCGCATTCTGCGGGATCACGCCGAAGCGGAGGAAGTGCTGGGCGACGTGTTCGCGCAGGTGTGGGGGCGTATCGACCAGCACGAGCCGAGTCGCGGCCCCCTCGTGCCCTGGGTCCTGTCGATCGCGCGTAATCGGTCCCTCGACGCGCTGCGCCGGCGGCGCCGCTGGTGGCGCAAGGCGGACCGCTGGGAGGCGGCGCAGCGGCTCGCGGACGACGGGGCCGTGCCCGCGCCGGATCCCGCGGAGGCCGCGGTGCCCGGGTGGCCCGTGCATCAGGAGGTCCACGCCGCGCTGGCCGCCCTGCCGGCGGACCAGCGGCTCGTGGTGACGCTCGCGTACTTCGAGGGCCTGACCCACTCGGAGATCGCCCGCCGCACGGGACAGCCGCTTGGCACGGTCAAGACACGGATGCGTATTGCGCACGGCAAACTGGCGGAGGCGTTGAAGCACGTGAAGGACTGGCTGCGATGA
PROTEIN sequence
Length: 200
VTQPKRLSQEDERTLVRRLKERDERALAELYDAMAPWVLGLATRILRDHAEAEEVLGDVFAQVWGRIDQHEPSRGPLVPWVLSIARNRSLDALRRRRRWWRKADRWEAAQRLADDGAVPAPDPAEAAVPGWPVHQEVHAALAALPADQRLVVTLAYFEGLTHSEIARRTGQPLGTVKTRMRIAHGKLAEALKHVKDWLR*