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PLM2_5_b1_sep16_scaffold_20_102

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 101027..101530

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 139
  • Evalue 1.70e-30
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 180.0
  • Bit_score: 139
  • Evalue 4.80e-31
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 154.0
  • Bit_score: 179
  • Evalue 2.10e-42

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGCCCGAGGATCTGGCTGAGATTTACCGCAGTACCTACCGCTCGCTCGTGCGTTTCCTGTACCGCAAGGTATGGGACGCCGAGCGCGCGGAGGACCTCGCCCAGGAAGCGTTCGCCCGGGCCCTGGTCCACAAACCGGAGAACGCGCGGGGGTGGCTGTTCGTCGTGGCGGCCAACATGGCACGAGATGACGCGCGCAAGGCGGCGCGCGAGCGGCGGCACCTCACGCTCCTCAAAGCGGAGCCGGGAGCCGGGAGCAAGGAGCTGGACGAGGAGATCGATGCCGATACGCAGCGCACGCAGGTCCGTGCGGCCCTCGACCAGCTGACGCCGCGCGATCGAGAGGCGCTACTGCTGTGGGACGCCGGAATGTCGTACGACGAGATCGCGACCCAGACGGGCCTGGCGCGCGGCGCAATCGGGACGACGCTGTCGCGAGCGCGGCGGCGCTTGGTCGAGGCCTACGATGCCGGAAGTGAGGGGCAACATGTCGCACGTGGATGA
PROTEIN sequence
Length: 168
MPEDLAEIYRSTYRSLVRFLYRKVWDAERAEDLAQEAFARALVHKPENARGWLFVVAANMARDDARKAARERRHLTLLKAEPGAGSKELDEEIDADTQRTQVRAALDQLTPRDREALLLWDAGMSYDEIATQTGLARGAIGTTLSRARRRLVEAYDAGSEGQHVARG*