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PLM2_5_b1_sep16_scaffold_23_58

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 53846..54376

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADT6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 182.0
  • Bit_score: 173
  • Evalue 1.50e-40
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 167.0
  • Bit_score: 173
  • Evalue 3.20e-41
Tax=RBG_13_Acidobacteria_68_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 171.0
  • Bit_score: 185
  • Evalue 4.00e-44

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Taxonomy

RBG_13_Acidobacteria_68_16_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGACGGACGAGCTCGTCCGCCGAGCGCAAGCTGGCGATCAGACGGCATTCCGGGATCTCTACCACCAGCTGGCGGGACGCGTGTACGCCCTGTGCCTGCGCCTCACCGGCGACGCGGGTGCCGCTGAGGAGCGCACGCAGGACGTGTTCGTGCGCGCCTGGGACAAGCTGCGCTCGTTTCGCGGCGAGAGCGCGTTCACGTCATGGTTGCACCGGCTCGCTGTGAACGTCGTGATGAACGAGCAGCGCACCAGGTTTCGCCGGGAGCAGCGCGTGACGCCGGTGGCCGATCCGGACACTGTTGTAGGGGCGCAGCATGCTGCGCCCCTACATGGATCCGCCGGTCTGAGCATCGATCTCGAGCGGGCGATCGCCGCCCTGCCCGAGGGAGCGCGGGAGGTCTTCGTGCTGTACGACATCGAAGGCTACAGTCACGCCGAGATCGGTGAAATGACCGGCATCGCCGAAGGGACGTCCAAGGCGCAGCTGTTTCGGGCGCGCCATTTGCTGCGGGAGAAGCTCGACCGATGA
PROTEIN sequence
Length: 177
VTDELVRRAQAGDQTAFRDLYHQLAGRVYALCLRLTGDAGAAEERTQDVFVRAWDKLRSFRGESAFTSWLHRLAVNVVMNEQRTRFRREQRVTPVADPDTVVGAQHAAPLHGSAGLSIDLERAIAALPEGAREVFVLYDIEGYSHAEIGEMTGIAEGTSKAQLFRARHLLREKLDR*