ggKbase home page

PLM2_5_b1_sep16_scaffold_23_81

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(87587..89461)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator domain Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCH3_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 30.2
  • Coverage: 650.0
  • Bit_score: 171
  • Evalue 2.60e-39
transcriptional activator domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 650.0
  • Bit_score: 171
  • Evalue 7.30e-40
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 639.0
  • Bit_score: 523
  • Evalue 2.90e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1875
ATGATGGTCTCCTGCCAAACGCTCGGGCCGCTCGAGGTCACCCTCGACGGCGCGCCGGCCCCCGACGACCTGCTCTGGCGCCGCAACATCGGGCTCCTCCTCTATCTCGCGCGCGCGCCCGCCCGTCGCTGCACGCGCGATCACGCGGTCGGCCTCTTCTGGCCCGAGAAGGACGACAGCGCCGCCCGGCAATCGTTGCGCGAAGCGACCAGCACCCTGCGGCGCTACCTCGGCGACCAGCTGCGCACGCCCGGAGACCAGCTCGAGCTCGCGGCCGGCGCCGTCGAGCTCGATACCGAGCAGTTCGACGCGCGCGTGGCCGCGCGCGACTGGGCTGGCGCGGCGCAGCTCGTCAGAGGCGAATTCGCGCAGGGCTTCAAGGTCCCGGATGCGTCGGCGTTCGAGGACTGGCTGCAAGTGGAGCGCGGGCACTGGAGCCGCCGCGCGACGGAAGTGCTGCTCGCGCACGCCGAGCAGCGGCTCGACGCGGGAGACCTGCTCGGCGCCGACGAGCCCGCCCGTCGCGCGCTGCAGCTCGATCCCCAGTCCCAGCGCGCGCTGCGCGCGACCATGCGACGGCTCGCGCTGGCCGGGGACCGCGCCGGCGCGCTCACGTTGTGCAACACCTTCGACGCCGACGCCGAACCGGAAACGGCGAGCCTCGCCGAGCGGCTGCGGCACGACCGCGCCTGGCGTTTGCCCGCGCGCGCCACGGCGCCGGAGGGCGTCGTGGAGTGGCGCCGCGCGCCACTCGTCGCCCGCGCGTCCGAGCTCGCGACCATCCTGGGTTGCTGGCGTGACGCCTGCTCGGGTCGCGCGGCCGTCGTGGTGATCGAGGCGGATGCCGGCGTCGGCAAGACGCGACTCGTCGAGGAAGTCATGGCGCGCGTAGCGCTCGACGGCGGCATCGCCATCGCGACGCGCGCGGTCCCCGCCGATCACGATCAGACTTTGGCGGGGATCCTCGGCCTTGCGCGCGGCGGGTTGTGTGACGCCCCGGGGGTCGCGGCAGCCGGCCCCGCCGCCCTGGGGGCGCTCGCGAGCGCCGTCGCCGAGTGGGCGGAACGCTTTCCAAACGCGCGGCCGGTCGGTTCGGCGCCCGACCTCGTGGCGGCACTGAGCGAGATCCTGCGAGTCGCCACCGCCGAGCAACCGCTGCTCCTCGTCTGCGATGACGCGCAGTGGCTCGACCCCACGTCCTTCGCGGCCCTCGAGACCTTGCTGCGCAATCTCGCCAAGGCGCCGCTCCTCCTGGTCATCGCGACGACCGGCGAGCCCAATCCTCCCACGCTCGCCGGCTTGCGATCGCGCCTTGGCCGCGACTTGCGCGGGGCCGCCGTGCGCCTGCAGCCCTTCGATGCCGCCGCGATGCAAACCCTGGTGCGGTGGGCGCTCCCCACCTACAAGCCCGAGGAGGCCGAGCGCCTGAGCCGCCGGATCTTCACGGACTCGGCGGGGAATCCGCTGCTTGCCGTCGAGATCTGCCACGCCGTCGCTCAGGGCCTCGATCTCGGATTGATGAAGGGCGCGTGGCCGCGCCCGCTCACGACGCTCGATCAAACAATGCCCGGCGACTTGCCCGACACGATCGTCGCCGCGATCCGTGTGGGCTTCAATTGTCTCAGCGCCGATGCGCGCGCCGCGCTCGCCGCCGTCGCCGTCCTCGGTGAGGGTGTGGAGCGCGTGACCGCCAAACGCGTCGGCGCCGCCACGCGGCTCGCGGACGCCGCCCTCGACGCGGCGCTCGACGAGTTGGAATGGCGGCGCTGGCTGGTGGCAGAGCGGCGCGGGTACAGCTTCGTCGCCCGCATCGCGCGCGACGTGGTGCGGCGCGACATGGTGACCCCCGGTCAGGCCCGGCGCATCCAGGGCTAG
PROTEIN sequence
Length: 625
MMVSCQTLGPLEVTLDGAPAPDDLLWRRNIGLLLYLARAPARRCTRDHAVGLFWPEKDDSAARQSLREATSTLRRYLGDQLRTPGDQLELAAGAVELDTEQFDARVAARDWAGAAQLVRGEFAQGFKVPDASAFEDWLQVERGHWSRRATEVLLAHAEQRLDAGDLLGADEPARRALQLDPQSQRALRATMRRLALAGDRAGALTLCNTFDADAEPETASLAERLRHDRAWRLPARATAPEGVVEWRRAPLVARASELATILGCWRDACSGRAAVVVIEADAGVGKTRLVEEVMARVALDGGIAIATRAVPADHDQTLAGILGLARGGLCDAPGVAAAGPAALGALASAVAEWAERFPNARPVGSAPDLVAALSEILRVATAEQPLLLVCDDAQWLDPTSFAALETLLRNLAKAPLLLVIATTGEPNPPTLAGLRSRLGRDLRGAAVRLQPFDAAAMQTLVRWALPTYKPEEAERLSRRIFTDSAGNPLLAVEICHAVAQGLDLGLMKGAWPRPLTTLDQTMPGDLPDTIVAAIRVGFNCLSADARAALAAVAVLGEGVERVTAKRVGAATRLADAALDAALDELEWRRWLVAERRGYSFVARIARDVVRRDMVTPGQARRIQG*