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PLM2_5_b1_sep16_scaffold_7_24

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(22978..23226)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FEH1_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 74.0
  • Bit_score: 68
  • Evalue 1.80e-09
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 74.0
  • Bit_score: 68
  • Evalue 2.60e-09
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 57.0
  • Bit_score: 65
  • Evalue 7.50e-09

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Taxonomy

Bifidobacterium angulatum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGCTGGCCCGCGAGACGTCGACGGACTGGTCGCTCAAACGCAGGAGCGACGACGTCGACGAGGAGTTCGGAGAATTCGAAGAGGACAAGGATCTCGACGAGGACTTCGACGACGATCTGGACGAAGATGACGTCGACGACGAGGACGGCGACGACGCCGACGACTACGACGACCTGGATGACGAATTCGACGACGGAGACGAGGACGAGTTCCGGCCCAAGAAGGGGCCGAAGCGGGAGTGGGACTGA
PROTEIN sequence
Length: 83
MLARETSTDWSLKRRSDDVDEEFGEFEEDKDLDEDFDDDLDEDDVDDEDGDDADDYDDLDDEFDDGDEDEFRPKKGPKREWD*