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PLM2_5_b1_sep16_scaffold_7_31

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(31098..34361)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 1121.0
  • Bit_score: 1281
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 1107.0
  • Bit_score: 1243
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 1121.0
  • Bit_score: 1281
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3264
ATGCCCCTCGATTTCCTGCTCGATCGATTCGACGATCTACCTGCGACGCGTGCGCTGGCGGAGCACCTGCCCGCGCCCGGCACCCGGCTCGGTGTCGGCGGGTTGTTCGGATCGAGTCCGGCGGTCTTGGTCGCGGCTCTCGCCCGGCGGCTGCCGCAGCGCGCGTTTTGCATCGTGGCGCCGACACCCGCGGATGCAGAGCGGTGGCTCGCCGATTTGGAGACGCTGGTCGGCGGCGGCGCGGCGCTCTACCCACAACGCGAGTCGCTGGGCGTCGAAGAGCCCCACTACGAGATCGCGGGCGAGCGGATCGAAACGCTCGAGCGCCTGTTGCGGGGCAGCGTGCGAATCCTGGTGACGACGGGGCGCGCGACGGCGGAGCGCACCGGCGTGCCGAGTGCGCTTGCGGCGATGCGAGTGGTGCTGCAACCCGGTCCGGCGCGCCTGGCCGAGGTTCTGAGTCGGCTGGAGCGGATGGGCTATGAGCGCGTACTGACGGTGACCGAGGTCGCGCAGTTCAGCGTGCGCGGCGGCATCCTCGACGTGTACGGGTTCGGAATGGCGGCGCCCGCGCGCATCGAATGGTGGGGCGACGACGTCGCCTCCCTGCGCAGCTTCGACCTCGACACGCAGCGCTCGGGGGACGCGATCGAGCGAGTCACGGTGCTGCCCGTGAAGGCGGAGCACCGGGCGACGGGAGCTGGGAGCGAGGTGCGGTCGTCTCTCCTCGAGCTTTTGCCTACCGATACCCTGCTGGTGGTGGATCAGGATTCCGCGGTCGAGCATGAGGTCGAACGCGCATGGGCGGATGCCGCGCACCATTTGGAAGTCGCGCGGCGCCTGGGAGAGGAGCCGCCGGCGCGCGAGGAGCTGTTCGTCGATCCACAGCAATGGAAGGAGCGCGTCGGGGCGTTCGGCCGTGTAGCCGTAGGCATCGAGGAAACCGACCAGCGCTTCCCGCTCGCGCCCCCCGAGCCGATCGAGCGTGATCTCAAGCGGCTGCGCCAGCTCGCCCTGGGCCCCGTGCCGACGGTCATCCTGTGCGACAACGAGGGACAGCTGGAGCGTCTGGAAGAACTGCTCGGCGAGGGTCGCGCCACGCTCGTGGTCGGAGCGCTCGACGGCGGGTTCGTGCTCCCCGCGCTGCGCGTCCTCACCGACCACGAGATCTTCCGGCGCGCGCGACGGCTCAGGCGGCCGCGTCGCTACCGGAGCGCAGCGTCGACCGCCGCGCAGCGGCCGCTGGCGGTGGGTGGGTACGTCGTGCACTTGGAGCACGGCATCGGGATTTACCGGGGCCTGCAGACGATCCCCGTCGGGGCCGAGGGTGTCACGCTCGAAGTCGCCGTCGTGGAATACGAAGGCGGCGACCGGCTCAACGTGCCCCTTTATCGGATCGACCAACTGGAGCCGTACCGAACGGCAGGAGACGCCGACGCGCCACCGCCGCGACTCCACCGTCTCGGCGCAACGACGTGGCAGCGCCAGCGGGACAAGACCCGCGCGGCCATCCTCGAGATGACGGCGGAGCTGCTCGACCTGTACGCGCGACGTCAGCTCGCCACCGGCTTCGCTTTTCCCTCTGACACGCCGTGGCAGCGTGAGCTCGAGTCGGCGTTCCTTTATGAAGACACGCCCGACCAGCGGCGCGCCTCTGAAGAGGTGAAGCGCGACATGGAGCGCGCGCGGCCGATGGACCGGCTCCTGGTGGGTGACGTGGGGTACGGGAAGACCGAAGTGGCGGTCCGCGCCGCCTTCAAGGCCGTGCAGGCGGGGAAGCAGGTGGTCGTGCTGGTTCCTACGACGATTCTCGCGGAGCAGCACGGTCGCACCTTCCGCGAGCGGTTGGCGGACTACCCGGTCCGTAACGAGGTGCTGTCGCGGTTTCGCAGTCCGAAGGAAACCAAGGCCGTCGTGGAGCGCATCGCGCGCGGGGAGGTGGACATCGTCATCGGGACGCACCGCCTGCTATCGCGCGATGTGGCGTTCAAGGACCTCGGCCTGCTCGTCGTGGACGAGGAACATCGGTTCGGTGTGCGGCACAAGGAACGGCTCAAAGCGCTGAAACTCGTCGTCGACGTCCTGACGCTCACGGCCACGCCGATCCCGCGAACCCTGCATCTCTCGCTCGCGGGACTGCGCGACCTGACGTTGCTCGAGACGCCGCCCAAGGACCGCTCGCCCATCCTCACGTTCGTCGAGCCGTGGGACGACTCGCTACTCGAAGAGGCGATGGCACGCGAGCTCGATCGTGGCGGCCAGGTGTACTTCGTGCATAATCGCATCGAAACGATCGCGACGATCGCCCAGCGCGTGCAAGCGCTCGCGCCGCGGGCGCGCGTCGCCGTGGCGCACGGACAGATGCGCGAGGCCGACCTCGAAGCGGTCATGGCGCGGTTCGTCCGCGGTGAGGTGGACGTGTTGCTGTCGACGATGATCGTGGAGTCGGGGCTCGACGTCCCCAACGCCAACACGATGATCGTCGACCGGTCAGACCGGCTGGGTCTGGCGCAGCTCTACCAGCTGCGCGGCCGCGTCGGACGCAGCCACCGGCGGGCCTACTGCTACCTGCTCGTGCCCGATCAGATGGACCCGCACGCGGAGGAACGTTTGCAGGTCCTCGAGCATCATACTGACTTGGGATCGGGGTATCGGATCGCCCTGCGCGACTTGGAGCTGCGTGGCGCGGGGAATCTGCTCGGCGGCGAGCAGTCGGGGCACGTGCAGGCGGTGGGCTTCGACATGTATCTGCGGTGGCTCGAGGAGACGGTGCGGGCGCTCAAACGGGAGCCCGGTGACGCGGGCCGGGAGTGGAGCCCACCCGACGTCACGCTCGACGCACCGGCGCATCTGCCGGAGACCTATGTGCCCGACGATCAAACGAAGCTCGACTTGTACCGGCGGCTGGCGCGGGCCGAGCAACCGTGCGAGATTCCGCCCGTGCGCGAGGAGCTGCGCGACCGATTCGGACCGCTGCCGCCGGAAGCCGAGCGTCTCCTCCTCGTCGCCGAGCTCCGCGCGCTCGGCGCCCAGGCAGGACTGGAAACGGTCCTGATCAAGGGCGACGAGGCGCGGCTCACGTTTCGGCGGGATGCCACGCCGCGGCTCGCGGGCTTGCAGGTCGCCCTCGAGCGCGTGCAGTTCGAGGCCGACGTGCGGCGCGCGGTGCCGCTCTCGCTCAGACTCCGCCGGCTCGGCGGAGAGACGATCGGCCCCGGCCTGGTCCGGGCGCTCACGGCCGTTCTGCAGGACCACCACGTCTAG
PROTEIN sequence
Length: 1088
MPLDFLLDRFDDLPATRALAEHLPAPGTRLGVGGLFGSSPAVLVAALARRLPQRAFCIVAPTPADAERWLADLETLVGGGAALYPQRESLGVEEPHYEIAGERIETLERLLRGSVRILVTTGRATAERTGVPSALAAMRVVLQPGPARLAEVLSRLERMGYERVLTVTEVAQFSVRGGILDVYGFGMAAPARIEWWGDDVASLRSFDLDTQRSGDAIERVTVLPVKAEHRATGAGSEVRSSLLELLPTDTLLVVDQDSAVEHEVERAWADAAHHLEVARRLGEEPPAREELFVDPQQWKERVGAFGRVAVGIEETDQRFPLAPPEPIERDLKRLRQLALGPVPTVILCDNEGQLERLEELLGEGRATLVVGALDGGFVLPALRVLTDHEIFRRARRLRRPRRYRSAASTAAQRPLAVGGYVVHLEHGIGIYRGLQTIPVGAEGVTLEVAVVEYEGGDRLNVPLYRIDQLEPYRTAGDADAPPPRLHRLGATTWQRQRDKTRAAILEMTAELLDLYARRQLATGFAFPSDTPWQRELESAFLYEDTPDQRRASEEVKRDMERARPMDRLLVGDVGYGKTEVAVRAAFKAVQAGKQVVVLVPTTILAEQHGRTFRERLADYPVRNEVLSRFRSPKETKAVVERIARGEVDIVIGTHRLLSRDVAFKDLGLLVVDEEHRFGVRHKERLKALKLVVDVLTLTATPIPRTLHLSLAGLRDLTLLETPPKDRSPILTFVEPWDDSLLEEAMARELDRGGQVYFVHNRIETIATIAQRVQALAPRARVAVAHGQMREADLEAVMARFVRGEVDVLLSTMIVESGLDVPNANTMIVDRSDRLGLAQLYQLRGRVGRSHRRAYCYLLVPDQMDPHAEERLQVLEHHTDLGSGYRIALRDLELRGAGNLLGGEQSGHVQAVGFDMYLRWLEETVRALKREPGDAGREWSPPDVTLDAPAHLPETYVPDDQTKLDLYRRLARAEQPCEIPPVREELRDRFGPLPPEAERLLLVAELRALGAQAGLETVLIKGDEARLTFRRDATPRLAGLQVALERVQFEADVRRAVPLSLRLRRLGGETIGPGLVRALTAVLQDHHV*