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PLM2_5_b1_sep16_scaffold_35_39

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(39433..40065)

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 210.0
  • Bit_score: 213
  • Evalue 2.00e-52
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 212.0
  • Bit_score: 178
  • Evalue 1.50e-42
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 207.0
  • Bit_score: 218
  • Evalue 6.70e-54

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGCCGCTGCGCGTTGTGTTGGCCGACGATCACCCGGCGCTCCGTCAGGGCGTACGTGCACTGCTCGAGCGGCACGGCGTCGAGGTGGTCGCCGAAGCAGCAGACGGCCGAGCGGCGGCCGACGCCGTCCGCGAACTGCACCCCGACGTCGTCGTGCTGGACGTCGTGATGCCGGTCCTGAACGGTGTCGACGCCGCCCGCGAGATCGCCCAAACGTGTCCCGAGACCCGCGTGGTGCTGCTCACCGGGCTGGACCAGGAGCGCCTGGTGACCGAGGCGGTGAGTGTGGGCGTACGCGGCATCGTCCTCAAGACCCAGGCGACGGAAGACCTCGCGCTGGCGGTCGAGCAGGTGGCGCGCGGTGGCTTTTACGTAGGAGCCGGCGTGTCCCGTGCCGTCGTGGACGCGTGCCGCGCTGCAGCGTCGGGAGATCGCGGCCGGCTCACTGCTCGAGAACGCCAGGTGGTGCAGCTCGTGGCGGAAGGCAGGTCCACCAAGGAGGTGGCCGCGCAGCTTGGCATCACGCCCAAGACGGCGGAGTTTCACCGCGCGCGCGTGATGCAGAAGCTCGATGTGCATGACGTGGCGAGCCTGGTCCGCTATGCGCTCCGAGAGGGCCTCATCACGCCCTAA
PROTEIN sequence
Length: 211
VPLRVVLADDHPALRQGVRALLERHGVEVVAEAADGRAAADAVRELHPDVVVLDVVMPVLNGVDAAREIAQTCPETRVVLLTGLDQERLVTEAVSVGVRGIVLKTQATEDLALAVEQVARGGFYVGAGVSRAVVDACRAAASGDRGRLTARERQVVQLVAEGRSTKEVAAQLGITPKTAEFHRARVMQKLDVHDVASLVRYALREGLITP*