ggKbase home page

PLM2_5_b1_sep16_scaffold_5_9

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(6276..7049)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B8_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 369
  • Evalue 2.00e-99
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 369
  • Evalue 5.80e-100
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 256.0
  • Bit_score: 369
  • Evalue 2.90e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGGAAACCGGCGTGAAAGAGGTGGAGCTGCGCGACTTGTGGCGACGCTACAAGGACAACGGTGACAGCGGTGCTCGGGAGCGCCTCGTGGTTGCCTACTCGCCCCTGGTCAAGTTCGTCGCCGGCCGCCTCGGCGCCGGCCTCCCCTCCCACGTCGAAGACGCTGACCTGATCTCCTACGGGTTGATGGGCCTGATCGGCTCGATCGAGCGCTTCGAGCCCGAGCGCGGGATCAAGTTCGAGACCTTCGCGATGACCCGGATCCGGGGCGCGATCATCGACGAGCTGCGCTCACTCGACTGGGTGCCGCGGTCGGTGCGCTCGCGGGCGCGCGAAATCGAGGCGGCGCAGGCCAAGCTCGAGCATGAGCTGCAGCGGGCGCCCACCGAGGCCGAGCTCGCCGCCAAGGTCGGCCTGACCGAAGAGGAACTGCAGACCTCGCTGCTGGAGATCGCCAACTCATCCGTCTACGCGCTGGACGAGCTCTGGACGATCTCCGACTCCTCCGGCGATTCGGTCTCCCTGCTGGACACGATCTCCGATCCGCGCGCCGATGACCCGCAGGAGTCCCTCGCCAGCAGCGAGATCAAGGACCGTCTTACCGAGTCGATCGCCGGCCTGCCGGAGCGCGAGCAGCTGGTCGTCGCCCTCTACTACTACGAGAACCTCACTCTGCGCGAGATCGGCGAGGTGCTCGGGGTCACCGAGTCGCGGGTCTCCCAGTTGCACACCAAGGCAGTGATGCGGTTGAAGTCCTCCCTGCAGGAGGTTTAG
PROTEIN sequence
Length: 258
METGVKEVELRDLWRRYKDNGDSGARERLVVAYSPLVKFVAGRLGAGLPSHVEDADLISYGLMGLIGSIERFEPERGIKFETFAMTRIRGAIIDELRSLDWVPRSVRSRAREIEAAQAKLEHELQRAPTEAELAAKVGLTEEELQTSLLEIANSSVYALDELWTISDSSGDSVSLLDTISDPRADDPQESLASSEIKDRLTESIAGLPEREQLVVALYYYENLTLREIGEVLGVTESRVSQLHTKAVMRLKSSLQEV*