ggKbase home page

PLM2_5_b1_sep16_scaffold_5_46

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(39668..40591)

Top 3 Functional Annotations

Value Algorithm Source
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 313.0
  • Bit_score: 304
  • Evalue 2.10e-80
riboflavin biosynthesis protein RibD Tax=Patulibacter americanus RepID=UPI0003B564C5 similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 315.0
  • Bit_score: 310
  • Evalue 1.80e-81
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 315.0
  • Bit_score: 308
  • Evalue 9.40e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGTACGTGACGCTGGAGCCCTGTGCGCATCAGGGACGACAGCCCCCTTGCACGGAGGCGATTCTGGAGACTGGGATCGAGCGGGTTGTGATCGCGTCCGACGATCCGAGCGAGAAGGCGTCCGGGCGCGGTCCGGGAATGCTTCGCGATGGGGGGGTGAAGGTCGACTTCGCCGCCGGCGAGGAGGCGACCGCGGCGCGGCTGCTCAACCAGCCTTTCCGCAAGCACGCCCGCACCGGCTTGCCGCTCGTAACCCTGAAGCTGGCGATGTCGCTGGACGGCCGGACCACGACCGCCGAGGGCGATTCGCCTTGGATCAGTGGGGCGAAGAGCCAGGAGCTGGTCCACCGCTGGCGCGCCGAATCGGACGCGATCGCGGTCGGCATCGGCACCGTCTTAGCCGACGACCCGCAGCTGACCGCCCGCGATCCCGATGCGGCCCGCCAACCGCTCCGCGTCGTCTTCGACCGCCAGGCGCGCTTACCACTCGATTCTCAGCTGCTCAGCACCCTCGATCAATCTCCGGTCGTCGTGGTCACCTCATCGGATGCGGACTCTCACCGGCGGTCGGCGTTGCGCAATGCAGGCGCCAAGATCATCGTTGCCGATGACATTCAAGCTGCCCTTGCCGGCCTCGGGAGGCAAGGCGTCACGAGCCTCTTCCTAGAGGGCGGTCGAACCCTAGCCTCAGCTTTTCTCGCCATGGACGCCGTCGACCAATCCCACACCTTCATCGCCCCGATCCTGTTGGGCGGAGGCGATCCTCGCGCGGGTGGCGTGGGGGAAGGGGGGGTCGAGGACGACCCCGCCCGCAGCGCCCCCCCTTCACCCACGACAGGACCCGCGCGCCGGTCGGCCCTGTCTCACGCAATCGAAGCTGTGGGAGACGACGTCCTGATCACCGCCCGCTTCAAGGAGTGGTGA
PROTEIN sequence
Length: 308
MYVTLEPCAHQGRQPPCTEAILETGIERVVIASDDPSEKASGRGPGMLRDGGVKVDFAAGEEATAARLLNQPFRKHARTGLPLVTLKLAMSLDGRTTTAEGDSPWISGAKSQELVHRWRAESDAIAVGIGTVLADDPQLTARDPDAARQPLRVVFDRQARLPLDSQLLSTLDQSPVVVVTSSDADSHRRSALRNAGAKIIVADDIQAALAGLGRQGVTSLFLEGGRTLASAFLAMDAVDQSHTFIAPILLGGGDPRAGGVGEGGVEDDPARSAPPSPTTGPARRSALSHAIEAVGDDVLITARFKEW*