ggKbase home page

PLM2_5_b1_sep16_scaffold_8315_15

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(14261..15415)

Top 3 Functional Annotations

Value Algorithm Source
Twitching motility protein Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 371.0
  • Bit_score: 498
  • Evalue 4.40e-138
Pilus retraction protein PilT {ECO:0000313|EMBL:CDM64249.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 370.0
  • Bit_score: 551
  • Evalue 8.00e-154
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 369.0
  • Bit_score: 496
  • Evalue 4.70e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGCCGACCCGAATTGACGATCTCTTGCGAATGGCGATGAGTTTTGGCGCCTCTGATCTGCACCTGCGTGCGGGGTCATATCCGGTCATTCGCGTAACGGGTGAATTAAAACCACTGTCGGGCGTCAGCCGGCTAAGTCAGGACGAGACTCTCGAGATGGCTTTCTCAATGATGTCCAATCGCCAAAAGCAGCATTTCAAAGAGGCGTTTGAGGTCGACATCGGATATGGAGTAGCAGGACTCGGGCGTTTTCGCGTAAATATATTTCAGCAGCGCAATTCCATCGGCATCGTCGCCCGTATGATCTCGGACACGATCAGAGGGTTTCCGGATCTAGGACTTCCGCCTATCCTGAATACGATCGCGGATGAGAATCGGGGACTAATCCTGGTTACCGGTACGACGGGTTCCGGTAAATCAACTACCTTGGCGGCGATTGTCGATCACATTAACCAGTCCCGCAATTGCCACATCGTAACGATCGAAGATCCGATCGAGTTTCTGCACAAGGACAAGTCTTCGTTCGTTACACAGCGTGAGGTCGATGTAGACACCCGCTCGTTTGCTGAGGCACTGCGCGGCAGCCTTCGGCAGGACCCGGACGTCATCCTGGTCGGCGAGATGCGAGACATAGAGACCATCGAAACAGCACTGGTCGCAGCTGAGACGGGCCATCTTGTGCTATCGACATTGCATACTCTCGATGCCTCAGAAACCCTGACCCGCATCATTTCGGCGTTTCCACCCTACCAGCAAAAATCCATCCGAATCCAACTGGCGGGGTTGCTAAAGGCGGTTGTTTCGCAGAGATTAATGAAATCCTCGAAAGGTAATAGCAGAATACCGGCGGTAGAGGTCCTCGTTTCGACGCCGCTTATTCGTGACTATATCCTTCACGAGGAAAAGACAAAGAGCATCAGAGATGCCATTGCTGCAGGTACGTCACAGTACGGCATGCAGACGTTTGACCAGTCGTTGTTCTATCTCTACCAGTCAGGCCTCATCAACCTCGACGAGGCTCTCCGCGGCACGACGAATCCTGATGAATTCCGTCTACGTCTTGCTGGTATCTCAAATACGACGACGGTTTCGAGAGAGGAGATGGAGAAAATGAGCGGCGTTGGCACGGTAACGGATATTTATACGCGGACGTAG
PROTEIN sequence
Length: 385
MPTRIDDLLRMAMSFGASDLHLRAGSYPVIRVTGELKPLSGVSRLSQDETLEMAFSMMSNRQKQHFKEAFEVDIGYGVAGLGRFRVNIFQQRNSIGIVARMISDTIRGFPDLGLPPILNTIADENRGLILVTGTTGSGKSTTLAAIVDHINQSRNCHIVTIEDPIEFLHKDKSSFVTQREVDVDTRSFAEALRGSLRQDPDVILVGEMRDIETIETALVAAETGHLVLSTLHTLDASETLTRIISAFPPYQQKSIRIQLAGLLKAVVSQRLMKSSKGNSRIPAVEVLVSTPLIRDYILHEEKTKSIRDAIAAGTSQYGMQTFDQSLFYLYQSGLINLDEALRGTTNPDEFRLRLAGISNTTTVSREEMEKMSGVGTVTDIYTRT*