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PLM2_5_b1_sep16_scaffold_13412_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(995..1510)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 227
  • Evalue 9.00e-57
Peptide deformylase Tax=uncultured Acidobacteria bacterium RepID=H5SCK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 170.0
  • Bit_score: 178
  • Evalue 3.40e-42
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 167.0
  • Bit_score: 172
  • Evalue 5.30e-41

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGATGTCGATAGTTCACTATCCTGAGCCTGTTCTGCTTACTGTGGGCAGGCCGGTCGAGGATGACGAGTTTGGCGAGGAGCTCGAGCGTCTCGCCGAGGATATGTTTGAGACGATGACACACGCCGGCGGCGTGGGCCTGGCTGCACCGCAGGTCGGTATCTCGAAGCGGCTTTTCGTGATGGACGTGCCGGTTGGGGATGAACAGCGTGAGCGGCATGTCCTGGTGAACCCCGAGATCGTACGTATCGAGGGCGAACAGGTGGGCGAAGAGGGTTGTTTGTCGTTTCCTGGCCTGTTTCAGGTGGTCAAGAGGGAAATGCGGGTAATTGCCCGTGCCCGGGATACCAAGGGTGAGGAATTTGAATTGGACGTCGCGGACCTGGCAGCACGATGCATATTGCACGAGACCGATCATTGCGACGGCATCGTTTTTTTGGATCGAATGACGCCCTTGAAGCGTGAAATGGCAAAGCGCAAGATCAAGACACTGCAAAAAACAGGGGAATGGAAGTGA
PROTEIN sequence
Length: 172
MMSIVHYPEPVLLTVGRPVEDDEFGEELERLAEDMFETMTHAGGVGLAAPQVGISKRLFVMDVPVGDEQRERHVLVNPEIVRIEGEQVGEEGCLSFPGLFQVVKREMRVIARARDTKGEEFELDVADLAARCILHETDHCDGIVFLDRMTPLKREMAKRKIKTLQKTGEWK*