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PLM2_5_b1_sep16_scaffold_14403_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(3648..4208)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R932_PIRSD similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 175.0
  • Bit_score: 180
  • Evalue 1.30e-42
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 175.0
  • Bit_score: 180
  • Evalue 3.60e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB15859.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 175.0
  • Bit_score: 180
  • Evalue 1.80e-42

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Taxonomy

Pirellula staleyi → Pirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGACTCAAGCCATCTTAAAACGCATCGCGGACGGTGATCGCAGCGCCGTACAGGATTGCCTGGATAAGTACGGCGGGCTCGTATGGTCCATTGCCCGCAAAATGCTTAGGAACACTGACGATGCAGAGGATGCTGTGCAGGAGATATTTGTCGACATTTGGAAGAACGCAAACCGCTTTGACGAGGCTAAGGCATCTGAAACTACCTTCGTTGCAATGCTCGCCCGGCGCCGGCTTATTGACAGGATAAGGTACTCGACGCGCCGGATCACCGCGGATTCCCTCGACGATGTCCTGCTCGAACCTTTTACCAGATCGGACCAGCAAATGCAGATGGCAGCCGAGGCCAGCCAGGCAGCCGAAGCAATGCGTTCGCTCAGGCCCGAACAGCAGCAGGTCCTAAGGCTTTCGATCATCCAGGGAATGTCGCATCAGGAAATTTCGGAGGCGACCGGCATGCCGCTCGGGACCGTCAAAACACATGCCCGCCGCGGATTGCTGCAGGTACGCGAATACCTGGGGCTCGGCGGACCGCATTTGTCCCAGGAGGTGGCCGTATGA
PROTEIN sequence
Length: 187
VTQAILKRIADGDRSAVQDCLDKYGGLVWSIARKMLRNTDDAEDAVQEIFVDIWKNANRFDEAKASETTFVAMLARRRLIDRIRYSTRRITADSLDDVLLEPFTRSDQQMQMAAEASQAAEAMRSLRPEQQQVLRLSIIQGMSHQEISEATGMPLGTVKTHARRGLLQVREYLGLGGPHLSQEVAV*