ggKbase home page

PLM2_5_b1_sep16_scaffold_16055_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1318..2328

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Q2_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 160.0
  • Bit_score: 60
  • Evalue 2.00e-06
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:CDM66198.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 258.0
  • Bit_score: 148
  • Evalue 1.00e-32
polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 160.0
  • Bit_score: 60
  • Evalue 5.80e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGTATTCCTCATCCTTTACTCAACGCAGATCACTCATCAAGCTGGTCGTTTCCACTCTTGCCATAGTCCTGTCGATATTTACGGGATATTCGGCCGGACAGGTTATCAACCCTGGTGGACGGAACAACCCTTACTCACCAAGTCCGGGGAGCAAAGTACTGCAGGGACAGACGGTATCCGTCACGACGGCTGACGAGACGGCACCAAACCCGCAAATTGCCATGGTCCAGCGAGCAAATCACGCCGGAAAAGGTATTGAAGCAAATTCCCGACGCCCAACTGAGGTGTATCACGTTGGTGTTGGCGACGTCCTGTTCATTGACCTTAAAAACACCGACCAGGGATCAGGTTATTTTACGGTCAGGGCCGACGGTACCATCGATTATCCCCTTGCAGGCGACAACGTGATTGCCGCCGGCAATTCAGTGGATACCATCGAATCCATTCTCCAATCGGGAATAAAGCTTTTCCAGGATCCCAGCGTTGCCGTGACCGTCCGCGAATTTGGAAGCCACAAGATATCAGTCACAGGGATGGTAGAAAATGGAGGCGAAAAGAGCCTTCAGCGCGAGGCAATACCTTTATACGTGGTCCGTGCCGAAGTCGGGGTCGACCCCAAAGCAGCTGGGGTGATCATCACGCGAGGGCCCTTCTCAACAAACGAATCATACGATCTTCACGATGCCGAGACGGATAATGTTTTGGTCTACCCGGGCAATACGGTTGAATTCACCGATGAAAATGGGTCAACTAATAATGCGGGTGGGTATTATTACATCGGCGGCGAAGTCAACTCATCGGGCCAAAAACCTCTATTGACGGGACTGACGCTATACCAAGCCATTGTAGCGGCCGGGACCCCTAAGAATGATCCTAAAAAAGCGACCATCCGACGGAAAAACTCCAGAGGCCTTTTTGATGTTTTGGAACATAACCTTAAAGCCATCAGAGACGGCAAGGCAGCCGACCCGACCTTATTCTCTGGTGATGTTGTCGAGATACGAAAGTAG
PROTEIN sequence
Length: 337
MYSSSFTQRRSLIKLVVSTLAIVLSIFTGYSAGQVINPGGRNNPYSPSPGSKVLQGQTVSVTTADETAPNPQIAMVQRANHAGKGIEANSRRPTEVYHVGVGDVLFIDLKNTDQGSGYFTVRADGTIDYPLAGDNVIAAGNSVDTIESILQSGIKLFQDPSVAVTVREFGSHKISVTGMVENGGEKSLQREAIPLYVVRAEVGVDPKAAGVIITRGPFSTNESYDLHDAETDNVLVYPGNTVEFTDENGSTNNAGGYYYIGGEVNSSGQKPLLTGLTLYQAIVAAGTPKNDPKKATIRRKNSRGLFDVLEHNLKAIRDGKAADPTLFSGDVVEIRK*