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PLM2_5_b1_sep16_scaffold_20060_2

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 461..1003

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2K9_THEOJ similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 161.0
  • Bit_score: 95
  • Evalue 3.10e-17
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM65055.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 175.0
  • Bit_score: 154
  • Evalue 7.80e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 161.0
  • Bit_score: 95
  • Evalue 8.70e-18

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCCGACCAAACAGCGGCGGCGGCAGCGAATGTGAATATCGAGTTTGATGAGGCGTTTACGCTGCATCATCGGACCGTGTTTCGCGCAGCCCGCTCTGTTGTCAGCGATCCGGGACTCGCGGAGGATGTGACTCAGGAAACTTTTCTCAGGTTTTATAAGCATCAGCATTCGATCACCGATCCGGAAATGCTTCGTCCGTGGCTGATTCGCGTTGCCATAAATGTTGCAAGGAATACCGTTCGCGGCAACATGAGGGCGAACACGCGGGACGAGAATTACGTCAAAGAAACAGGCGTATACGAATCGGCGTCGCTCGAGACCGATTATGAGGAACACGAGGGCGTGAGCGAGATCTATCGTGCATTGAACAAGATCAAGGAACCGCTCCGCAGTTGTCTCGTCCTCAAACAGCAAGGCCTCTCGTACAAAGAGATCGCGGCCAGTCTCGAGTTGAATGAAACGAGTATCGGGACCTATGTAGCCCGGGCGAGGCAGGAATTTAGCCGGTTTTACGGCAAGATCGGCAAGGAAGCATTATGA
PROTEIN sequence
Length: 181
MSDQTAAAAANVNIEFDEAFTLHHRTVFRAARSVVSDPGLAEDVTQETFLRFYKHQHSITDPEMLRPWLIRVAINVARNTVRGNMRANTRDENYVKETGVYESASLETDYEEHEGVSEIYRALNKIKEPLRSCLVLKQQGLSYKEIAASLELNETSIGTYVARARQEFSRFYGKIGKEAL*