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PLM2_5_b1_sep16_scaffold_40524_3

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1308..2861)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate 5-dehydrogenase Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRS7_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 528.0
  • Bit_score: 302
  • Evalue 8.10e-79
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00179162}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 529.0
  • Bit_score: 403
  • Evalue 2.80e-109
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 528.0
  • Bit_score: 302
  • Evalue 2.30e-79

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
GTGAATAACGGGAAGCTCTGCATATCCATCTGTGCTGAGACCGTTGACGAACTGATTCGTGGTATAGAACGCGCAGAGGAACTGGCCGATGTTACTGAGATACGATTCGATTGCCTAAATAAGGCTGAGTTCTATTGTGAAAAACTAGAAGAATTCAATCGGATCATCGATAAGTTGCTCAAATATAAGAAAGAAGTTCCGTGGATATCGACCTTTCGGCCCAAATCGCAGGGTGGTCGCCGGGAATTATCGGACTTAGAACGGAGCATCTTTTGGTTCAGCGGTTACGAACTGGATCAGGGAGATTTTGAGGAGGATGTAATTGAGGATTCCTTTTATTGGCTGTGGTTTGACAGCATTTGTTCTTATCATGATTTTTCGGGATTGCATGAGAAGTCTGATGAGATCTATACACGCTTAAAAGGTACCGGTGCTCCAATCCTTAAGATCGCTGTTGAGACTCACGACGTCGCTGACGCATTACCGATCTGGAAGCTGCTAAAGCGAGCAAGAGTAGACGGAAAAGAAATGATTCCGATCGCCATGGGCGAGGCAGGCAAATGGACTCGTATCCTCGGCCTTGCTCACGGTGCGTACCTTACATATGCCTCGTTAGAGGCTGGCGGCGAGACTGCACCCGGCCAGCTTATCGCCAGCGAAATGATCGATGTTTACCGCGTCAAGCAACTCGATCGTGAGACAAAGGTTTATGGCGTCATCGGCGATCCGGTTTCCTCATCTCTCTCGCCTGTTATTCACAACGCGGCATTCGTCGCCAATGGCCTAAACGCGGTTTTCATTCCATTGCTGGTCAAAGACCTGGACGAGTTCATGCGTCGAATGGTGCGGCAGGAAACTCGTGAGGTCGAGCTAAATTTCGCGGGATTTGCGGTCACGATGCCGCATAAGCAGGCAGTAATAAAATATCTTGACGGTTTGGACGATGTTGCCGCTACAGTGGGGGCCGTAAACACGATAAATACAGAGGACGGCAAACTGGTCGGCTATAACACGGACGCTGCCGGTTTTATTGGGCCGCTAAAGAGAACTTTTGGTGATCTCAAAGGCGCTCGCGTCGCCGTGATCGGTGCCGGCGGTGCTGCACGGGCGTGTGTCTATACCTTAAAGAGCCAAGAAGCGGATGTCACGATCATCGCCCGGGACGAAAGCAAAGCCCGAGCCCTGGCGGAGGAATTTACCGCAGGGAGTTCCGGCCTCTCAAAGATCAAAGATCCAAGTTCAAAGGCCTCCTTAAATGACTTCGACATCATCGTTAACGCCACGCCCATAGGTATGAAAGGCGAGCTCGAAACCCAAAGCCCCCTTACCGCCCATGAACTAGCGGGTGTAAAATTCGTATTTGATCTTGTAACGTCAGCGGATGACACGCCGCTGATCCGCGAGGCGAAAAAGGCCGGAGTTTCGGCGATCGGCGGCGAGGAAATGTTGCTGGAGCAAGCTGCGAAACAATTTGAGATCTGGACAGGCGGGTCGGCTCCGATCGACGTTATGCGAGACGCATTGAACAAAAAACAGCAGGAAACACGAGGATGA
PROTEIN sequence
Length: 518
VNNGKLCISICAETVDELIRGIERAEELADVTEIRFDCLNKAEFYCEKLEEFNRIIDKLLKYKKEVPWISTFRPKSQGGRRELSDLERSIFWFSGYELDQGDFEEDVIEDSFYWLWFDSICSYHDFSGLHEKSDEIYTRLKGTGAPILKIAVETHDVADALPIWKLLKRARVDGKEMIPIAMGEAGKWTRILGLAHGAYLTYASLEAGGETAPGQLIASEMIDVYRVKQLDRETKVYGVIGDPVSSSLSPVIHNAAFVANGLNAVFIPLLVKDLDEFMRRMVRQETREVELNFAGFAVTMPHKQAVIKYLDGLDDVAATVGAVNTINTEDGKLVGYNTDAAGFIGPLKRTFGDLKGARVAVIGAGGAARACVYTLKSQEADVTIIARDESKARALAEEFTAGSSGLSKIKDPSSKASLNDFDIIVNATPIGMKGELETQSPLTAHELAGVKFVFDLVTSADDTPLIREAKKAGVSAIGGEEMLLEQAAKQFEIWTGGSAPIDVMRDALNKKQQETRG*