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PLM2_5_b1_sep16_scaffold_40540_1

Organism: PLM2_5_b1_sep16_Acidobacteria_Holophagae_53_17

near complete RP 47 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 1..1569

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028B9_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 26.4
  • Coverage: 512.0
  • Bit_score: 189
  • Evalue 4.50e-45
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:CDM65911.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 522.0
  • Bit_score: 404
  • Evalue 1.30e-109
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 512.0
  • Bit_score: 189
  • Evalue 1.30e-45

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGACGCTGGCGATCGGGTATGTCGTTTACAGATTGCCCGCCATTTACGAATCGACTTCGCTGTTGACAGTGAAACCGCCTACGATCTCGCCTCATTTTATCCAGTCACTGACCAGCGAAGATCTGTCTCAACGACTTCAGACCATTAACCAGGAGGTCCTGAGCCGTTCATCGCTGGAACCCATGATCCAGAAATACGACCTTTATAAAGAGGAGCGGGCATCGGGCATACCGGTGGAACTGATCGTCGACAAACTTTATAAGAATATAAAAGTCGATCTTGAAGACCCGTCCAGTGCAAAGGTGGCCGCATTTCGTATCCGATATCGTGACCGTGACCCGCAAGCGGCTCGAAACGTGACCGCAGATCTTGCCGGCAAATATGTTAGCGCACAGATGCAAAACTCAGTTGAGATCGCTGAATCGACAAATCAACTTTTCGATAGGCAATTGGCAGAGAAAAAAGCGGCGCTTGACGACCTGGAAAAGCAGCGGCTCGAGATCATGAATCAAAATATAGAGACCTTGCCCGAATCAGAACAGGGCCTCGTCTCTCAGCTGCAGGGCCTGCGGCAGCGTGAAGACGCGATCCTCAAAGAAAAACAATCCCTTTATAACGAGAAAGGCCGGCTCAGCGATGCGATCAGTTCTAACAATCGACAGATAAAGCTGATCGAGGATTTTAGCAATCAGGAATCGGAGGATACCGCCCGTCAGGCTTCTGATCCCGAATCGACACCGGCATACGGAGAGCTCGTTAGAAAACGCGCGGACCTGAATGCGCAATTAGACGCTCTCTCTAAAGTCTATAAGCCCAAACATCCTGCGATGATCGCGAAACAAAGTGAATTGCAGCGTGTGAACGACGAATTTGAAAATCTGAAAAAGACCACCGAAAAGCGTGTTGCGGCTGCCACGAAGGGCATCTCGCGAAAGACCGAAATGCAGAAAAATAGCCTGCTTCTCGAAAACCAAAGGGTCCAGTCTCAGATTGGGTTAATAGAAAAGGAATTGGGCGACGAAGACAGCGAACGTGAACGCAATGCCGTCCAGATCCAGCAACTGGAAGCCCGGATCAATGCGGTACCTAACGTCAAGGTTGCACTCGAGGGTCTCAATTCCCGTTATCAATCGGCAAAGCAGACATATGACGAGATATTAAAGAAAAAGAACGATGCCGAAACAGTGGTAGGTGTCGAGACAAATGCTCAGGGTGAGACCATTCGGGTCCAGGATGCGGCAAACATCCCACAATCCCCGGTCGCGCCTAAGCGGTTCCTGCTTACGCTTGTCGGTGCTGGTTTCGGTGTGCTCTTGGGCTTGTTAATGGCCGGATTCTTCGAGATCCCGAGGTTATTCAGGATCCAGAACATTGACGATGCAAGGCACTATACCGGACTGCCGGTACTGGCGTCGGTCCCGCCGCTTTTATCGCCGGCAGAAAAGGACTGGATCAGGCGTGCTTACTGGATGAAATTGTTTGCTGGCGTTGCCGCCGCGATCGGCGTCATTCCGCTGATAATTATATTTCTTCAGGTGACTAAATTATTCGAGAAACTGGTTTCATAG
PROTEIN sequence
Length: 523
MTLAIGYVVYRLPAIYESTSLLTVKPPTISPHFIQSLTSEDLSQRLQTINQEVLSRSSLEPMIQKYDLYKEERASGIPVELIVDKLYKNIKVDLEDPSSAKVAAFRIRYRDRDPQAARNVTADLAGKYVSAQMQNSVEIAESTNQLFDRQLAEKKAALDDLEKQRLEIMNQNIETLPESEQGLVSQLQGLRQREDAILKEKQSLYNEKGRLSDAISSNNRQIKLIEDFSNQESEDTARQASDPESTPAYGELVRKRADLNAQLDALSKVYKPKHPAMIAKQSELQRVNDEFENLKKTTEKRVAAATKGISRKTEMQKNSLLLENQRVQSQIGLIEKELGDEDSERERNAVQIQQLEARINAVPNVKVALEGLNSRYQSAKQTYDEILKKKNDAETVVGVETNAQGETIRVQDAANIPQSPVAPKRFLLTLVGAGFGVLLGLLMAGFFEIPRLFRIQNIDDARHYTGLPVLASVPPLLSPAEKDWIRRAYWMKLFAGVAAAIGVIPLIIIFLQVTKLFEKLVS*