ggKbase home page

PLM2_5_b1_sep16_scaffold_1573_17

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(13847..14740)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Frankia sp. (strain EuI1c) RepID=E3JBQ7_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 298.0
  • Bit_score: 345
  • Evalue 2.80e-92
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 298.0
  • Bit_score: 345
  • Evalue 7.90e-93
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP81077.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 298.0
  • Bit_score: 345
  • Evalue 3.90e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGAGCGAGCGGGCCGAGGAGCTGGCCGCGGCCTACAGCGCCGTCCGGCCGCGGCTGGTCGGGATCGCGTACGCGGTGCTCGGCACCAGGGCCGAGGCGGAGGACGTGGTCTCGGACTGCTGGCTGCGACTGGCGCACGCCGACGCCCGCGAGCCGGTCCGGGACGTGGCCGGCTGGGCCGTCGTCGCGGTGTCCCGGCGGGCACTGGACGTGCTGCGCTCGGCCCGGGTGCAGCGGGAGTCGTACATCGGGCCGTGGCTGCCGGAGCCGATCCTCGACGACCCGGCCGACCGGGTCAGCCTGGACGAGCGGGTCAGCTTCGCGTTGATGGTGGTGCTGGAGACGCTGTCGCCGGCCGAGCGCACGGCCTGGGTGCTGCACGAGCTGTTCGGGATGCCGTTCCCGGAGATCGCCCGGGTCGTCGGCCGCAGCCCCGCCGCGGTGCGCCAGCTGGCATCCCGGGCGCGGGCGCACGTCGCCGCCGGGGCGCCGCGGCTGGACGTCGACGCCGCCGACCACCGCCGCACGGTCGAGGCGTTCCTGGCCGCGACCGCCGGCGGCGACCTCGCCGGCCTGCTGGCCGTGCTCGACCCCGACGTGGTGTTGACCAGCGACGGCGGCGGGATCGCGCTGGCCGCGCGACGCCCGGTGCTGGGCGCGGACCGGGTGGCCCGCCTGCTGCTCGGGGCGGCACACCGGCAGCCGGTCGTGCACCGCGCGGTCACGATCAACGGCCAGGCCGGGTACGCCACGACCGACCCGGACGGCCGGCTGCTCGCCGTCTGCGCGCTGACCGTCCGCGACGGTCGGGTGGTCCGGGTCGACCTGGTCATGTCGCCGGCCAAGCTCCCGCAACCGTCGCACGATGAGACGGTCGGCTCCGGGCCGACATGA
PROTEIN sequence
Length: 298
VSERAEELAAAYSAVRPRLVGIAYAVLGTRAEAEDVVSDCWLRLAHADAREPVRDVAGWAVVAVSRRALDVLRSARVQRESYIGPWLPEPILDDPADRVSLDERVSFALMVVLETLSPAERTAWVLHELFGMPFPEIARVVGRSPAAVRQLASRARAHVAAGAPRLDVDAADHRRTVEAFLAATAGGDLAGLLAVLDPDVVLTSDGGGIALAARRPVLGADRVARLLLGAAHRQPVVHRAVTINGQAGYATTDPDGRLLAVCALTVRDGRVVRVDLVMSPAKLPQPSHDETVGSGPT*