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PLM2_5_b1_sep16_scaffold_1187_17

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(15911..16150)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane anti-sigma factor Tax=Amycolatopsis mediterranei RepID=G0FSH8_AMYMS similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 72.0
  • Bit_score: 80
  • Evalue 5.80e-13
Transmembrane anti-sigma factor {ECO:0000313|EMBL:GAM50053.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 72.0
  • Bit_score: 83
  • Evalue 1.30e-13
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 72.0
  • Bit_score: 80
  • Evalue 1.70e-13

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Taxonomy

Nocardia seriolae → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGACCGAGCCGCTGGACTGCGACGAGTTCGTCGAGCTCGTCACGGCATACCTGGAGGACGCGCTCGAGCCGGCCGACCGGCAGCGGGTGCTCGATCACCTCGACCTGTGCGACGGCTGCTCGACGTACCTGGAGCAGATCCGGGCGACGGCCCGGGTAGTGGGCGACCTGCCGGCGCCGGGCGGGCTGCCGGACACGGGCCGGCAACGGTTGCTGGAGGCGTTCCGCCGCCGGCCGTAA
PROTEIN sequence
Length: 80
VTEPLDCDEFVELVTAYLEDALEPADRQRVLDHLDLCDGCSTYLEQIRATARVVGDLPAPGGLPDTGRQRLLEAFRRRP*