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PLM2_5_b1_sep16_scaffold_3087_8

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(10712..11203)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W1V7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 164.0
  • Bit_score: 159
  • Evalue 2.70e-36
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 164.0
  • Bit_score: 159
  • Evalue 7.50e-37
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:AGZ43084.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 164.0
  • Bit_score: 159
  • Evalue 3.70e-36

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGGAGTTCTCCGAGTACGTGGCGGCGCGGGGCACGGCCCTGGAGCGGTTCGCCTACGTGCTCACCGGGGACGCGCACCTGGCCCAGGACCTCGTCCAGATCGCGCTGCTCAAGGCGTACCGGCGGTGGCGGTGGGTGGCCAGGGCCGAGCACCCGGACGCGTACGTGCGGCGCATCGTCACCCGGTCCTACCTGGACTGGCGGCGCCGGCGCAGCAGCGGCGAGCTACCGGTCGGCGTCGTCCCGGACCGGCCGGAACCCGACCTCGCCGAGGGCGTCGCCGAGCGGGACCGGCTGCACCGCGCGCTCGGCACGCTCTCGCCGAAGCAGCGGGCCGTGCTGGTGCTGCGGCACTACGAGGGCCTTGACGACGCGGCCATCGCCGCGCTGCTGCGCTGCGGTGAGGTGTCGGTGCGCTCGCACGCGAGCCGAGGGCTGGCCCGGCTGCGCGCGTCGCTGGACCAGACGACCACGCCGGGAGGGTCGCGATGA
PROTEIN sequence
Length: 164
VEFSEYVAARGTALERFAYVLTGDAHLAQDLVQIALLKAYRRWRWVARAEHPDAYVRRIVTRSYLDWRRRRSSGELPVGVVPDRPEPDLAEGVAERDRLHRALGTLSPKQRAVLVLRHYEGLDDAAIAALLRCGEVSVRSHASRGLARLRASLDQTTTPGGSR*