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PLM2_5_b1_sep16_scaffold_5755_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1071..1958

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T238_AMYOR similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 295.0
  • Bit_score: 365
  • Evalue 2.60e-98
Hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 293.0
  • Bit_score: 370
  • Evalue 2.30e-100
Uncharacterized protein {ECO:0000313|EMBL:AIG76822.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 293.0
  • Bit_score: 370
  • Evalue 1.10e-99

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Taxonomy

Amycolatopsis japonica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGCCGAGTCCGACCGGCTGATCGAGGGCTTCGCGGAGAACCGGACCCGCCTGCGGGCGGTGGCCTACCGGATGCTCGGCTCGTTCGCCGAGGCCGACGACGCCGTGCAGGAAGCCTGGTTGCGGCTGACCAAGGCGGATTCCAGTGAGGTCGACAACCTCGGCGCCTGGCTGACCACCATCGTCGCCCGGGTGTGCCTGAACGTGCTGCGCTCGCGGCGAACGCGACCTGAGGAGCCGTTCGGCGCACATCTGCCCGACCCGGTCATCAGCCGCACGGACCGGACGAGCCCGGAGGACGAGGCTCTGCTGACGGACTCGGTCGGGCTCGCGCTGCAGGTGGTACTCGACACGCTGACCCCGGCCGAGCGACTGGCATTCGTCCTGCACGACATGTTCGACCTGCCGTTCGACGACATCGCGCCGATCGTGGGGCGGTCCTCGACCTCGGCCAGGCAGCTCGCCAGCCGGGCCCGGCGCCGGGTGCGAGGAGCCGACGTGCCCCGCCCCGACGCTGACATCGGCCGTCAGCGCGACGTCGTGGACGCGTTCTTCGCCGCCGCGCGCCGGGGCGACTTCGACGCGCTCGTCACGGTGCTCGACCCCGACGTCGTGGAGCGGGTCGACGCGGGGACGGCGCGGCCGGACATCTCCGGGATGGTCCGCGGGGCGCGGGTCGTCGCCGGCCGGGCGATCATGTTCGACCAGCCTTCCCCACGGCTGCGGCCGGTGCTGGTCAACGGCGCCGCGGGTGTCGTCGTGATCGTGCGCGGCCAGCCGTTCGCGGTCATGGCGTTCACCGTCTCGGACGGCAGGATCGTGGAGATCGACGTGCTGGCCGACCCCGACCGCCTCAATCGCCTCGACCTGGCCGTCCTGGATGGCTGA
PROTEIN sequence
Length: 296
MAESDRLIEGFAENRTRLRAVAYRMLGSFAEADDAVQEAWLRLTKADSSEVDNLGAWLTTIVARVCLNVLRSRRTRPEEPFGAHLPDPVISRTDRTSPEDEALLTDSVGLALQVVLDTLTPAERLAFVLHDMFDLPFDDIAPIVGRSSTSARQLASRARRRVRGADVPRPDADIGRQRDVVDAFFAAARRGDFDALVTVLDPDVVERVDAGTARPDISGMVRGARVVAGRAIMFDQPSPRLRPVLVNGAAGVVVIVRGQPFAVMAFTVSDGRIVEIDVLADPDRLNRLDLAVLDG*