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PLM2_5_b1_sep16_scaffold_6374_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 3645..6554

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQC5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 960.0
  • Bit_score: 519
  • Evalue 6.00e-144
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 960.0
  • Bit_score: 519
  • Evalue 1.70e-144
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA28398.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 960.0
  • Bit_score: 519
  • Evalue 8.50e-144

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2910
GTGATCCCCGCGTCGGGGGTGCAACAGGAGGTCAACGCGCATGTCGCCCCGGTCCCGGATCGGACCGGACCGGTGATGGCCGGCCCGTTGCAAGCGGCTGCCGGGCGGATGGTCGGCCGCACCGCCGAGCTCGCCGCGCTACGCGAGCAGCTGGCCGGGTTGCGCGCCACCGGCACCGGCGGTCTGGTGCTGATCTCCGGCGAGGCCGGCGTCGGCAAGTCGAGGCTGGTCCGCGAGTTCGCCGTCGGCGCCGAACGCTCCGGCGTCTCGGTGCTGATCGGCCGGGCCCTGCCGGACGGTGAGCCGTACCGGCCGCTGGTCGAGGCGCTCGGCGGCGCGCTGCGGGACCGCGGGCTGCCCGACGACGAGACCCTCCGGCCGTACCTGCCGGTGCTGGCGGCGGTGCTGCCGGACGCCGCGGTGCCAGGCGGGCGGGCCGACCCGCGCGGCGGGGCGGTGCTCGGTGAGGCGGTGCTGCGGCTGCTCGGCGCGCTCGGCCACCGGTCCGCCGGCGCCTGCACCCTGCTCGTGCTGGAGGACCTGCACTGGGTCGACCCGGACACGCTGACCGTGCTGACCTACCTGGCGCACGCGGCCGAGTCCAGCCCGCTGCTGCTGGTCGCGACCACCAGGGCCGAGGTCGCGCTGCCGCAGCCGCTGCTCGACCTGGCCGCCGCGACCCAGGCCGCCGAGCTGACCCTGGAGCGGCTGGACGCCGACGACGTCCGCGAGCTGGTCGAGGTCTGCCTGTCCGGCCGGCCGCCGGAGGAGGTCATGGCGTTCGTCCGGGACAACGCCGACGGCCTGCCGCTGCTGATCGAGGAGCTGTTGACCGGGCTGCGGTCGGTCGGCGCGCTCGACCCGGCCGGTCGGCTGGTCGGACCGCTGACCCCGGCGGTGCCGCGCACGTTCGCGGCGACCGTGCGGCGCCGGGTGGAGGACCTCGACCCGGCCGCCCGGTCGGTGCTCCAGGCGGGGGCTGTGCTCGGCCGCCGGTTCGACTGGCGGCTGCTGCCCGAGGTGACCGGGCTGGCCGAGGCCGAGGTGCTGGGCGCGCTGCGGGCCGGGGTGCGGTCCGGGCTGATCCGCGCCGGCGACGGGGACACGTTCGAGTTCCGGCACGCGCTGACCGGGGAGGCGATCCGGGACGACCTGCTGCCGCCGGAGCGGCGGGCGCTGGCCCACGCGGCCGCGGAGATCGTCGAACGCCGCGACCCGGAGGCGTACGCGCTGGCGGCCGGGCTGCGGGCGGCGGCCGGCGAGGACGAGCGGGCGGCCGAGCTGTCGGTGGCGGCCGGCAAGGAGGCGGTCCGGCAGGGCGCGCTGGCCACGGCCGACCTGCTGCTGGCCAGGGCCGCCGACCTGGCCACCGCGCCGGAGCTGGTCACCCAGGCCGAACGAGAGCTGCTGACCGTGCTGGCCGCCAAGGGCGACGCCGAGCGGTCGCTGGCCCTGGGCGAGCGGCTGCTGCGGGATGGCGACGAGAGCGTCCGGCTGGTGCTGGCCGAGGTCGGCGCGGAGGCCGAGCGCTGGGACGTGGCCGCGGCGTACCTGTCCGCGATCCCGGACGGCGGCGACCCGCGGCTGAGCGTGCTCGTCGCCCGGCTGGCGTACGCGCGGGGGGAGCCGGAGCGGGCCAGGGAGATCGCCCTGACGACGCTGCGTGCGGCCCAGGAGCAGGAGCTGTGGTCGGTCGCCTGCCAGGCACTCGAGGTGATCGGCCGGGTCGCCCGCATCGACGACGCGGCCAGGGCCCGGGACGCGTTCGCGGCCGCCGAGGCGCTCGCCCGCGAGCACGACCTGCCGACCAGCCGGGTCTCCGCGCTGCACGAGCTCGGCACCGTCGACCTGCTCCAGGACGGCTCGACCGCCCGGCTGGAGCGGGCCCGGCAGCTGGCCGAGGAGGCCGGCGTGCTCGGCAAGGCCGCGACCCTCGACCTGCAGATCGCCGCCGGGCTGCTGCACGGGGACCCCGCCCGCGGGCTGGAGCACGCCCGCCGCTGCGCCGACCTGGCCCGGCGGCTGCGCGCCGACCGGGTGCACGCGACCGCGGTCTGCTTCCAGGCCATCGCACACATCGAGCTCGGCGACCGGGAGCAGGCCGAGCGGTGCACCGCCCAGGCCCTCACGCTGGCCCCGGACGACCTGGACATCAACGCCGCGGTCTGGGGCCAGATCCGGGCGCACGACGCGCTGCTCGCCGACGACCTGCCCCGGCTGCTGGCGAGCCTGGACAAGGCCGAGGACTACCTGCGGCGCAGCCCGAGCACCGCCGCGACGCCGATCCGCGGCCTGTGGGCGCTGGTCCGCACGCTGTCCGGCCAGGACGGCGACGCGGCCAGGGCCGAGGCCGGGCCCTGGTCGGTGAACTGGGAGAACGCGGCCCTGCTCGGATACGCCGAGGCGGTTGCCTGCGGCCGCCGGAGCCGGCAGCGGGAGGCCGACCGGGAGCTGACCGAGGCCGACCGGGCGATGGCCACGCTGCCCTGGTGGCAGCACCGGGTCCGGCTGCTGGTCGCCGACGCCGCGCTCACCGACCACTGGGGCGACCCGGTCGGCTGGGCCAGGGAGGCGCTGCCGGTCTTCGCTGGCCGCGGCGAGACCCGGCTGGCCAGCCGCTGCCGCGAGGTCCTGCGGCGGGCCGGCGCGCCGGTGCCCCGGCCCGGCCGTGGCGACACCCCGGTGCCGTCGGCGCTGCGCGCGGTCGGGGTGACCAGCCGCGAGGTGGACGTGCTGCAGCTGATGGGCGAAGGGCTGACCAACACGGCGATCGCCCAGCGACTGGTGCTCTCACCCCGGACGATCGAGACACACGTGGCCAACCTGGTCGCGAAGACCGGCGTGAGCAACCGGGCCGGGCTGGTCGCGCTGGCCCGGGCGCGGATTAAGTCCGGGCCGGAAGCGAGCTAA
PROTEIN sequence
Length: 970
VIPASGVQQEVNAHVAPVPDRTGPVMAGPLQAAAGRMVGRTAELAALREQLAGLRATGTGGLVLISGEAGVGKSRLVREFAVGAERSGVSVLIGRALPDGEPYRPLVEALGGALRDRGLPDDETLRPYLPVLAAVLPDAAVPGGRADPRGGAVLGEAVLRLLGALGHRSAGACTLLVLEDLHWVDPDTLTVLTYLAHAAESSPLLLVATTRAEVALPQPLLDLAAATQAAELTLERLDADDVRELVEVCLSGRPPEEVMAFVRDNADGLPLLIEELLTGLRSVGALDPAGRLVGPLTPAVPRTFAATVRRRVEDLDPAARSVLQAGAVLGRRFDWRLLPEVTGLAEAEVLGALRAGVRSGLIRAGDGDTFEFRHALTGEAIRDDLLPPERRALAHAAAEIVERRDPEAYALAAGLRAAAGEDERAAELSVAAGKEAVRQGALATADLLLARAADLATAPELVTQAERELLTVLAAKGDAERSLALGERLLRDGDESVRLVLAEVGAEAERWDVAAAYLSAIPDGGDPRLSVLVARLAYARGEPERAREIALTTLRAAQEQELWSVACQALEVIGRVARIDDAARARDAFAAAEALAREHDLPTSRVSALHELGTVDLLQDGSTARLERARQLAEEAGVLGKAATLDLQIAAGLLHGDPARGLEHARRCADLARRLRADRVHATAVCFQAIAHIELGDREQAERCTAQALTLAPDDLDINAAVWGQIRAHDALLADDLPRLLASLDKAEDYLRRSPSTAATPIRGLWALVRTLSGQDGDAARAEAGPWSVNWENAALLGYAEAVACGRRSRQREADRELTEADRAMATLPWWQHRVRLLVADAALTDHWGDPVGWAREALPVFAGRGETRLASRCREVLRRAGAPVPRPGRGDTPVPSALRAVGVTSREVDVLQLMGEGLTNTAIAQRLVLSPRTIETHVANLVAKTGVSNRAGLVALARARIKSGPEAS*