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PLM2_5_b1_sep16_scaffold_6827_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 2669..4294

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Salinispora arenicola RepID=UPI000361CB6B similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 553.0
  • Bit_score: 679
  • Evalue 2.50e-192
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 553.0
  • Bit_score: 678
  • Evalue 9.40e-193
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 553.0
  • Bit_score: 678
  • Evalue 4.70e-192

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Taxonomy

Salinispora arenicola → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
GTGGCAGCCGATCCCCGCACCGACAGCACCGCCGCCGGCGGGTCCGATCCGACCCGCGACCTCGCGGAGCATCTCGTCTCCAGGGGACGTCACCAGGGATTCCTGCGCGCGAACGACATCAGCCGCGCCTTCGAGGAGGCCGGCCTGCCGGCCTCGCACGGCAAGCGCGTGCTTCGCACGCTCAGCGACTCGGGAGTGACCGTCATGCTCGATGCGCCCTCCGCCCCGTCGGGGCGGGGCAAGTCCGCCCGGACCGCGGCCGCCGCCGCTCCGTCCCGCAGCACCGTCACGAAGAGCACCCGCCCGTCGACGCGGCCCGGCTCGGAGCCGACCCGGTCCCGGGCCGCCGCGCAGGAGGGGGCTGCGCTGCAGGCCGTGCCCGACCCGGCCACCGCCGAGGCGCCGGCCGGGAAGACCGCCCAGGCGACCACGGCCGCTCCGGCCAAGCGGAAGCGGAAGACCGCGGCCGCGGCGCCGGCTGCGGCGCCCGCCCCCGGTGCACCGGCGACCCCGCCGGCCGACGGCGAGGAGCCGGCCGAGGGCGCGCTGGCGATCGACGAGCCGACCGAGTTGACCGCCGCCGGCCCGGCCGCCGTCGAGGAGGCCGACGCCGAGGACTTCACCTGGGACGAGGAGGACGAGGAGTCCGAGGCGCTGCGGCAGGCCCGCAAGGACGCCGAGCTCACCGCCTCCGCCGACTCGGTCCGGGCCTACCTGAAACAGATCGGCAAGGTCGCCCTGCTCAACGCCGAGGAGGAGGTCGACCTGGCCAAGCGGATCGAGGCCGGGCTCTACGCGGCGGAGCGGCTGCGCCGGATGGAGGAGGCCCGCCTCGCCGGCAAGAAGACCGACCAGCTGTCCCCACAGCTGCGCCGCGACCTGATGTGGATCGTCCGCGACGGCGAGCGCGCGAAGAACCACCTGCTCGAGGCCAACCTGCGGCTGGTCGTCTCGCTGGCCAAGCGCTACACCGGGCGCGGGATGGCGTTCCTGGACCTGATCCAGGAGGGCAACCTCGGCCTGATCCGGGCGGTCGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCGACGTACGCGACGTGGTGGATCCGGCAGGCCATCACCCGGGCGATGGCCGACCAGGCCCGCACCATCCGCATCCCGGTGCACATGGTCGAGGTCATCAACAAGCTCGGCCGCATCCAGCGCGAGCTGCTCCAGGACCTCGGCCGCGAGCCGACCCCGGAGGAGCTCGCCAAGGAGATGGACATCACGCCCGAGAAGGTGCTGGAGATCCAGCAGTACGCACGGGAGCCCATCTCGCTCGACCAGACCATCGGCGACGAGGGCGACTCGCAGCTCGGTGACTTCATCGAGGACTCCGAGGCGGTCGTCGCGGTCGACGCGGTGTCGTTCACGCTGCTGCAGGATCAGCTCCAGTCGGTGCTGCAGACGCTGTCCGAGCGGGAGGCCGGCGTGGTCCGGCTGCGGTTCGGGCTCACCGACGGCCAGCCGCGGACGCTGGACGAGATCGGCCAGGTCTACGGGGTCACCCGGGAGCGGATCCGGCAGATCGAGTCGAAGACCATGTCCAAGCTCCGTCACCCATCGCGGTCCCAGGTCCTGCGGGACTACCTCGACTGA
PROTEIN sequence
Length: 542
VAADPRTDSTAAGGSDPTRDLAEHLVSRGRHQGFLRANDISRAFEEAGLPASHGKRVLRTLSDSGVTVMLDAPSAPSGRGKSARTAAAAAPSRSTVTKSTRPSTRPGSEPTRSRAAAQEGAALQAVPDPATAEAPAGKTAQATTAAPAKRKRKTAAAAPAAAPAPGAPATPPADGEEPAEGALAIDEPTELTAAGPAAVEEADAEDFTWDEEDEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVDLAKRIEAGLYAAERLRRMEEARLAGKKTDQLSPQLRRDLMWIVRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*