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PLM2_5_b1_sep16_scaffold_4079_2

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(805..1344)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000375BF2E similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 176.0
  • Bit_score: 190
  • Evalue 9.10e-46
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 174.0
  • Bit_score: 189
  • Evalue 5.70e-46
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 174.0
  • Bit_score: 189
  • Evalue 2.80e-45

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGGACGTTCCTGTCGACGAGATCACGCTGGCGGCGCTGGCCGCCCGCGACGGCGACCAGGCGGCCGCGGCCCGGTTCGTCCGGGCGACCCAGGCCGACGTCTGGCGGCTGTGCGCGCACCTCGGTGACCACGGGGAGACCCAGGACCTGGCCCAGGAGACCTATCTACGCGCGTTCCGGTCGCTCGGCTCGTTCGAGGGGCGGGCCGCGGCGAAGACCTGGCTGCTCGCCATCGCCCGCCGGACCTGCGCGGACGCGGTCCGGGACCGGCGGCGCCGGCCGCGGGTCGATCCCGGCGCGACGGTGCCGGAGACCGCCCAGGGTGGCGACCTGTCCGACGGGGTGGCGCTGCGCCGGCAGGTCGGCGCCCTGAGCCCGGACCGGCGGGACGCGTTCGTGCTCACCCAGCTGGTCGGGCTGAGCTACCCCGAGGCGGCCGAGGTCTGCGGGGTCCCGATCGGCACGATCCGGTCCCGGGTGGCCAGGGCCCGCGAGGACCTGGTCGCCGGCCTGTCCGAACGGCGCGGCCGGACCGGCTGA
PROTEIN sequence
Length: 180
VDVPVDEITLAALAARDGDQAAAARFVRATQADVWRLCAHLGDHGETQDLAQETYLRAFRSLGSFEGRAAAKTWLLAIARRTCADAVRDRRRRPRVDPGATVPETAQGGDLSDGVALRRQVGALSPDRRDAFVLTQLVGLSYPEAAEVCGVPIGTIRSRVARAREDLVAGLSERRGRTG*