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PLM2_5_b1_sep16_scaffold_5378_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 3..1121

Top 3 Functional Annotations

Value Algorithm Source
Peptidase S54, rhomboid domain protein Tax=Frankia sp. CN3 RepID=G6HNF2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 395.0
  • Bit_score: 172
  • Evalue 4.10e-40
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 196.0
  • Bit_score: 163
  • Evalue 9.10e-38
Rhomboid family protein {ECO:0000313|EMBL:ABK51789.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 196.0
  • Bit_score: 163
  • Evalue 4.50e-37

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
GACGGCGGCGGGCAGACCCGGCCCGGGCTGTGGAGCGGCCAGCCGGCCGACGACGGCGGGCAAGCCCCGCCCGGCCAGGGGGGCCAGCCGGCCGACAGTGGCGGCCAAACCCAGCTCGGACAGGCGGGCGGCCAGGCCGGCAGCGCCGGCAGCCCGCCCGGACGGTGGGGCCAGCAGCCCGACCCCGCCGTCGACCAGGTCGGGCAGTGGAGACAGCCGACCGACCAGCCCGGCAGCGGCTACGCCCAGCCTGAGCAATGGGGACAGCCGACCGACCAGGCCGGTGGCGGCTACGCCCAGCCCGGACAGTGGGGCCAGCCGACTGACCAGACCGGTGGCGGGGGCTACGCCCAGCCCGGTCACTGGGGCCCGCCCGCTGACCAGGCCAGCGGGTGGGGAGCGCCGACCAACCAGGCCGAGACGGCCTCGTACGGGCAGCCGGCCGAGGCGTGGGCGCCCGGCGATCCGGCGTACGGCCGGCTGGGCAAGCAGACCCCTCCACCACCTCCGCAGCAGCGCCCGCGCCGGCCCTGGGACGGTCGGCCCGCGCCGGCACGCAGCCGCCCCGGCGGCACCGCCGTCGTCACGATCACGCTGATCGCGATCTGCGTCGTTGTCTACCTGATCCAGCAGGCCAACCCGGCGTTCACCGCCCGGTACGCGCTGATCCCGTTCGCCGTGGAGCAGGGCCAGTACGCGCGGCTGATCACCAGCGCGTTCCTGCACGCCAGCGTGCTGCACCTGGCCACGAACATGATCACGCTCTACATCGTCGGCGCGCCGCTGGAGCGGGTCCTGCGCCCGGTCCGCTACCTGATCGTCTACTTCCTGTCCGCGCTCGGCGGATCGCTGTTCTCGGTCTGGCTGAGCCCGGAGTTCTCGATCGGCGTGGGCGCGTCCGGCGCGATCTTCGGCCTGTTCGGGGCGCTGCTCGTGCTGCGCCGGCAGGTCGGCGCCGAAGCCGGCGCGCTGGCCGTGCTGATCGGGCTCAACCTGGTCATCTCGTTCACCCTGCCGAACATCAGCTGGCAGGCACACATCGGCGGCCTGGTCACCGGCACGCTGGTCGCGCTGGCGCTGCGGGGCGTCGACCGGATCTCCCGCCGACCGGCCACCTGA
PROTEIN sequence
Length: 373
DGGGQTRPGLWSGQPADDGGQAPPGQGGQPADSGGQTQLGQAGGQAGSAGSPPGRWGQQPDPAVDQVGQWRQPTDQPGSGYAQPEQWGQPTDQAGGGYAQPGQWGQPTDQTGGGGYAQPGHWGPPADQASGWGAPTNQAETASYGQPAEAWAPGDPAYGRLGKQTPPPPPQQRPRRPWDGRPAPARSRPGGTAVVTITLIAICVVVYLIQQANPAFTARYALIPFAVEQGQYARLITSAFLHASVLHLATNMITLYIVGAPLERVLRPVRYLIVYFLSALGGSLFSVWLSPEFSIGVGASGAIFGLFGALLVLRRQVGAEAGALAVLIGLNLVISFTLPNISWQAHIGGLVTGTLVALALRGVDRISRRPAT*