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PLM2_5_b1_sep16_scaffold_5557_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: 1..489

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 Tax=Amycolatopsis methanolica RepID=UPI0003753229 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 151.0
  • Bit_score: 199
  • Evalue 1.80e-48
rpoE; RNA polymerase sigma-W factor similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 151.0
  • Bit_score: 199
  • Evalue 5.00e-49
RNA polymerase sigma-W factor {ECO:0000313|EMBL:AIJ27151.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 151.0
  • Bit_score: 199
  • Evalue 2.50e-48

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GCGCTGATCTCGGCGTACAAGGCGGCCGGGTCGTTCCGCGGCGACTCGGCGGTAACCACCTGGCTGCACCGGATCGTGGTCAACGCCTGCCTGGACCGGATGCGCCGGCGGCAGACCCGAGCGACCGTGCAGCTGCCCGAGGAAGGGCCGCACGAGCCGGCCGACAGCCGGGACCGGGTGGCCGAGCGGGAGACCCGGATGGTCGTGGAGGAGGCGCTCCGCCAGCTGCCGGCCGAGCAGCGGGCGGCGATCGTGCTGGTCGACGTCGAGGGCTGGTCGGTCGCCGAGACCGCGGCGATGCTCGGCGTGCCCGAGGGCACGGTGAAGTCGCGCTGCGCCCGCGGCCGGGCCCGGCTGGCCGTCTTGCTCGGTCACCTGCGGAACCCGGACGAGCCCGCGCCCGTCGCACCTAGATCGGGCAGTGCGTCCGGCGGTGAGTCCGGCGGGAGATCCGGCAGCGGATCCGGCAGCGGCGAGGAGGCGAGATGA
PROTEIN sequence
Length: 163
ALISAYKAAGSFRGDSAVTTWLHRIVVNACLDRMRRRQTRATVQLPEEGPHEPADSRDRVAERETRMVVEEALRQLPAEQRAAIVLVDVEGWSVAETAAMLGVPEGTVKSRCARGRARLAVLLGHLRNPDEPAPVAPRSGSASGGESGGRSGSGSGSGEEAR*