ggKbase home page

PLM2_5_b1_sep16_scaffold_6124_3

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1440..2996)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 510.0
  • Bit_score: 633
  • Evalue 2.10e-178
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003797AC1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 514.0
  • Bit_score: 640
  • Evalue 9.60e-181
ATP-dependent DNA ligase I similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 510.0
  • Bit_score: 633
  • Evalue 4.30e-179

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGACCGTGCTGCTGCGCGACCTGGCCGACACGTCGGCGGCGGTGGCCGGGACGTCCGCGCGGCTGGGCAAGGTCGGGCTGCTCGCCGACGTGCTGGGCCGGGCCGACCCGGACGAGGCCGCCGCGGCGGTGGCGTTCCTGTCCGGCGAGCTGCGGCAGCGCCAGATCGGCGTCGGCTGGGCCACGCTGCGCGAGGTGCCGCCGCCGGCGGACTCGCCGACCCTGCGCGTCGGCGAGGTCGACGCGATCTTCGAGGAGATCGGGCGGCAGGCCGGGGCCGGGTCGCAGGCGGCCCGGCGGGCGTTGCTGGCCGAGCTGTTCACCCGGGCCACCGCGCCGGAGCAGCGGTTCCTGCGGCAGTTGCTGATCGGCGAGCTGCGCCAGGGTGCGCTCGAGGGCGTCATGGTCGACGCGGTCGCCCGGGCGGCCGGCGTGCCGGGCAAGGACGTGCGGCGGGCGGTGATGCTGCGCGGCGACCTCGGCGTGGTCGCGGCCGCGGCGCTGGCCGGCGGTGCGGCGGCGCTGGCCGAGTTCCGGCTCGAGGTCGGCCGGCCGGTGCTGCCGATGCTGGCGCAGACCGCGGACAGCGTGGACGCCGCGCTGGCCAAGCTCGACGCCTCCGCGGACAGCCCGGCCGCGGTCGAGTGGAAGCTCGACGGGGCGCGCATCCAGGTGCACCGCAGCGGGACCGACGTCGCGGTCTACACCCGGTCGCTGGACGACATCACCGCCCGGGTGCCGGAGGTGGTGGAGGCGGCGCTGGCGCTGCCGGTGACCGCGGTGGTGCTCGACGGGGAGGCGATCGCGCTGAAGCCGGACGGCCGGCCGCAGCCGTTCCAGGTGACCGCGTCCCGGGTCGGCAGCCGCGGCGACCCGGCCGCGCTGCGGGTGGCCACGCCGCTGTCGCCGGTGCTGTTCGACCTGCTCCACCTCGACGGGGCCGACCTGCTCGACGCGCCGGGGTCCGAGCGGGCGGCGGCGATGGCGAAGGTGGTGCCGGAGTCGGTGCGGGTGCCGCGGGTGGTGGCCGGGACGGTGGCCGAGGCCTCGGCCGCGTTCGCGGCGGCGCTGGACCGCGGGCACGAGGGCGTGGTGGTCAAGTCGCTGTCCACGCCGTACGAGGCGGGTCGGCGCGGTGCGGGCTGGCTGAAGGTGAAGCCGAGGCACACCCTCGACCTGGTGGTGCTCGCGGTCGAGCACGGGCACGGGCGGCGGACCGGCTGGCTGTCGAACCTGCACCTCGGGGCGCGGGACCCGGCCGGCGGGTTCGTGATGCTCGGCAAGACGTTCAAGGGGCTGACCGACGCGATGCTGCGCTGGCAGACCGAGCGGTTGGGGGCGCTGGCGGTCGACGACTCCGGCTGGGTGGTGCGGGTCCGGCCGGAGCTGGTGGTGGAGGTCGCCTTCGACGGCGTGCAGACGAGTCCGCGCTATCCCGGCGGGGTCGCGCTCCGGTTCGCCCGCGTGCTCCGCTACCGCGAGGACAAGACCGCCGCCGAGGCGGACACCATCGACACCGTCCGCGCGATCCACGCCGGAACCCGCCTCCCCACCTGA
PROTEIN sequence
Length: 519
MTVLLRDLADTSAAVAGTSARLGKVGLLADVLGRADPDEAAAAVAFLSGELRQRQIGVGWATLREVPPPADSPTLRVGEVDAIFEEIGRQAGAGSQAARRALLAELFTRATAPEQRFLRQLLIGELRQGALEGVMVDAVARAAGVPGKDVRRAVMLRGDLGVVAAAALAGGAAALAEFRLEVGRPVLPMLAQTADSVDAALAKLDASADSPAAVEWKLDGARIQVHRSGTDVAVYTRSLDDITARVPEVVEAALALPVTAVVLDGEAIALKPDGRPQPFQVTASRVGSRGDPAALRVATPLSPVLFDLLHLDGADLLDAPGSERAAAMAKVVPESVRVPRVVAGTVAEASAAFAAALDRGHEGVVVKSLSTPYEAGRRGAGWLKVKPRHTLDLVVLAVEHGHGRRTGWLSNLHLGARDPAGGFVMLGKTFKGLTDAMLRWQTERLGALAVDDSGWVVRVRPELVVEVAFDGVQTSPRYPGGVALRFARVLRYREDKTAAEADTIDTVRAIHAGTRLPT*