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PLM2_5_b1_sep16_scaffold_6124_5

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(3528..7367)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RNA helicase Tax=Actinomadura madurae LIID-AJ290 RepID=U2MAP9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 1308.0
  • Bit_score: 1604
  • Evalue 0.0
ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACY98219.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 1307.0
  • Bit_score: 1598
  • Evalue 0.0
ATP-dependent helicase HrpA similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 1307.0
  • Bit_score: 1598
  • Evalue 0.0

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3840
ATGTCTTCTTCCCTCGCTGAGCTGCGGGCTCGGCTGCCCGAGCTGACGCTGCGCGACGAGTTCCGGTTGCGGCGCCGGCTCGACGGCCTGCGCGGGACCGGGGTCCCGCCCGTGCTGGCCGAGGAGATCGAGAAGGCCGCTGCCAGGGCCGCGCGGCGGCGGGCCGCGATCCCGGCCGTCAGCTACCCGGGCGAGCTGCCGATCACCGCCCGCAAGGACGACATCCTGGCCGCGATCCGGGACCACCAGGTCGTCGTGATCGCCGGCGAGACCGGCTCCGGCAAGACCACCCAGCTGCCCAAGATCTGCCTCGAGCTCGGCCGGGGCGTGCGCGGCACGATCGGGCACACCCAGCCGCGCCGGATCGCCGCCCGTACCGTCGCCGAGCGGATCTCGGCGGAGCTCGGCGTCGAGCTGGGCAGCGCGGTCGGCTACCAGGTCCGGTTCACCGACCGGGCCACCGAGGACACCGCGGTCAAGGTGATGACCGACGGCATCCTGCTGGCCGAGATCCAGCATGATCGGATGCTGCGCCGGTACGACACGCTGATCATCGACGAGGCGCACGAGCGCAGCCTCAACATCGACTTCCTGCTCGGCTACCTCAAGCAGCTGCTGCCCCGCCGGCCCGACCTCAAGCTGATCATCACCTCCGCGACGATCGACCCGGACCGGTTCGCCGCGCATTTCGGCGGGGCACCGGTCGTCGAAGTCTCCGGCCGGATGTACCCGGTCGAGGTCCGCTACCGCCCGCCGGAGGACGGGGTCGACCAGATCGAGGCGATCACCGCCGCGGTGGACGAGCTCGGCCTCGAGGTGTCCGGCGACGTGCTGGTCTTCCTCTCCGGCGAGCGGGAGATCCGGGACACCGCGGACGCGCTGCGCCGGCACCTGCCCGACGGCACCGAGGTGCTGCCGCTGTTCGCCCGGCTGTCCGCGGCCGACCAGCACAAGGTGTTCGCGCCGCACGCCGGCCGGCGGATCGTGCTGGCCACGAACGTCGCCGAGACCTCGCTCACCGTGCCCGGCATCCGGTACGTGGTCGATCCCGGCACCGCGCGGATCTCCCGGTACAGCGCCCGCACGAAGGTGCAGCGGCTGCCGATCGAGCGGGTCTCGCAGGCCAGCGCGGACCAGCGCAAGGGCCGCTGCGGGCGTACCGCCGACGGTGTCTGCATCCGGCTCTACGCCGAGGAGGACTTCGACTCCCGGCCCCGGTTCACCGAGCCCGAGGTGCAGCGGACCAACCTCGCCTCGGTGATCCTGCAGATGACCGCGCTCGGGCTCGGTGACGTCGGCGCGTTCCCGTTCGTCGACCCGCCGGACCGGCGCGCCGTCGCCGACGGCGTCGCCCTGCTCAACGAGCTGCGCGCGCTGGACGACGGCGCCCTCACCGAGGTCGGGCGCACGCTGGCCCAGCTGCCGATCGACCCGCGGCTGGGCCGGATGGTGCTGGCGGCCCAGCACAACGGCTGCCTGCACGAGGTGCTGGTGATCGCCGCAGCACTGTCGATCCAGGACCCGCGGGAGCGGCCGGCCGAGAAGCAGGAGGCGGCCGACGCCGCCCACCGCCGGTTCGCCGACCCGGCCTCGGACTTCACCACCCTGCTCAACCTCTGGAACTACCTGGAGGACCGGCAGGACGCGCTGTCCTCCAGCGCGTTCCGGCGGCTGTGCACGGCCGAGTTCCTGCACTACCTGCGGGTGCGGGAGTGGCAGGACCTGTACGGACAGCTGCGCAGCATCCTGCGCCAGCTCGGGATCGCGGTGCCCCGGCCCGCGGCCGAGGTGGACCCGAAGGCGGTCACCCGCTCGCTGCTGGCCGGCCTGCTCTCCCACCTGGGCATGCGGGAGGAGACCGGCCCGCGCTCGCGCGAGTACGCCGGGGCGCGGGGCGCGAAGTTCGCGATCTGGCCCGGCAGCGCGCTGGCCAAGCAGCCGCCGCGCTGGGTGGTGGCGGCCGAGCTGGTGGAGACCTCCCGGCTGTGGGCCCGTACGGTCGCCCGGATCGAGCCGGAGTGGGCCGAGGAGCTGGCCGGCCACCTGGTCGTCCGGTTCTACAACGAGCCGCACTGGTCGAAGCGGCGGGCCGGGGTGGTCGCGACCGAGCGGGTCACGCTGTTCGGGCTGCCGATCGTCGTCGGCCGGCCGGTCGACTACGCCCGGATCGACCCGGAGCTGTCCCGGGAGCTGTTCGTCCGGCACGCGCTGGTCGAGGGCGACTGGCGGTCGGACCACCGGTTCCTGGCCGCGAACCGGGCCCTGCTGGAGGACGTCGAGGAGCTGGAGCACCGCACCCGTCGGCGCGGGCTGGTGGTCGGCGACGATGCGCTGTTCGACTTCTACGACCAGCGGGTGCCGGCCGACGTGGTGTCCGGACGGCACTTCGACGCGTGGTGGAAGACGGCCAGGCGGACCGATCCCGAGCTGCTCACCTTCACCCGGGAGATGCTGCTCAAGGCCTCCGGTGACGAGGTCGACACCGCCGACACGCCGGACGAGTGGACCCAGGGCGGCCTGACGCTGCCCGTGGCGTACCGGTTCGAGCCGGGCGCGCCGGACGACGGGGTGACCGTCGAGGTGCCGCTGGCCGCGCTCAACCGGGTCCGCCCGGAGGGCTTCGACTGGCAGGTGCCGGCGCTGCGCGAGGAGCTGGTCACGGCGCTGATCCGGTCGCTACCCAAGCAGCTGCGGCGCAACTTCGTGCCGGCCCCGGACGTGGCCCGCGCGGTGCTCGCCCGGCTGGAGCCCGGCCGCGAGCCGCTGGTGGAGGCGCTGGCCCGGGAGCTGCGCCGGGCCAGCGGGCAGGACGTGCCGATCACCGCGTTCGACTGGACGAAGGTGCCCGCGCACCTGCGGACCACGTTCCGGGTGACCGACGGGCCGAAGACCTTGGCCCAGGGCAAGGACCTCGAACAGCTGCAGCGCCGGCTCGGCCGGACCGTGCAGGACGTGCTGTCCGAGGCGGCCCGGTCGCTGGAGCGCTCCGGTCTGACCACCTGGACGGTCGGCACGATCCCACGCACGTTCACCGCGGAGGGCACGAACGGGCTGGTCGGCTACCCGGCGCTGGTGGACCAGGGCGCCACCGTCTCGCTGACCGTGCTGCCGACCGAGGCGGAGCAGCGGGCCGCGCACTGGGCCGGCGTACGGCGGCTGCTGCTGCTCGGCGTGCCGTCCCCGCTCAAGTGGGTCTCCGGACGGCTGGACAACCGGGCCAAGCTGACCCTCACCCAGAACCCGCACGGCAGCCTGCCGGCCTTGCTGGCCGACTGCTCGGCCGCCGCCGCGGACGAGATCCTGACCGAGGCCGGCGGGCCGCCCTGGGACGCCGAGGGCTTCGGCAAGCTGCTCGACCGGGTCCGGGCCGAGCTCAACGAGCGGGTGCTCGAGCTGCTGCGGGCCGCGCAGCAGGTGATCGCCGAGTGGCGGCCGCTGACCACCCGGCTGGCCGAGCCGGTGCCGGCGCCGCTGCGGCCGGCCGTGGACGACCTGACCGCACAGGTCGGCGCGCTGGTCGGGCCCGGGTTCGTGGCCGCGACCGGGCGTCGGCGGCTGCCGGACGTGCGCCGCTACCTGGCCGCGGCCAACCACCGGCTGGACCGGTTGCCCGGTGACGTCGCCCGGGACACGGCTCGGATGGCCAGGGTGCACGCCGTGCACGCGGAGCTGGACGGGTTCGTGGCCGGGCTGCCGCCGGGCCGGCGGGAGGCCGACGAGGTACGCCAGCTGCGCTGGATGGTGGAGGAGTTGCGGGTCAGCCTGTTCGCGCAGTCGCTCGGTACGCCGTACCCGGTCTCGGAACAGCGGATCTACCGGGCGATGGACCAGCTCGATTAG
PROTEIN sequence
Length: 1280
MSSSLAELRARLPELTLRDEFRLRRRLDGLRGTGVPPVLAEEIEKAAARAARRRAAIPAVSYPGELPITARKDDILAAIRDHQVVVIAGETGSGKTTQLPKICLELGRGVRGTIGHTQPRRIAARTVAERISAELGVELGSAVGYQVRFTDRATEDTAVKVMTDGILLAEIQHDRMLRRYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKLIITSATIDPDRFAAHFGGAPVVEVSGRMYPVEVRYRPPEDGVDQIEAITAAVDELGLEVSGDVLVFLSGEREIRDTADALRRHLPDGTEVLPLFARLSAADQHKVFAPHAGRRIVLATNVAETSLTVPGIRYVVDPGTARISRYSARTKVQRLPIERVSQASADQRKGRCGRTADGVCIRLYAEEDFDSRPRFTEPEVQRTNLASVILQMTALGLGDVGAFPFVDPPDRRAVADGVALLNELRALDDGALTEVGRTLAQLPIDPRLGRMVLAAQHNGCLHEVLVIAAALSIQDPRERPAEKQEAADAAHRRFADPASDFTTLLNLWNYLEDRQDALSSSAFRRLCTAEFLHYLRVREWQDLYGQLRSILRQLGIAVPRPAAEVDPKAVTRSLLAGLLSHLGMREETGPRSREYAGARGAKFAIWPGSALAKQPPRWVVAAELVETSRLWARTVARIEPEWAEELAGHLVVRFYNEPHWSKRRAGVVATERVTLFGLPIVVGRPVDYARIDPELSRELFVRHALVEGDWRSDHRFLAANRALLEDVEELEHRTRRRGLVVGDDALFDFYDQRVPADVVSGRHFDAWWKTARRTDPELLTFTREMLLKASGDEVDTADTPDEWTQGGLTLPVAYRFEPGAPDDGVTVEVPLAALNRVRPEGFDWQVPALREELVTALIRSLPKQLRRNFVPAPDVARAVLARLEPGREPLVEALARELRRASGQDVPITAFDWTKVPAHLRTTFRVTDGPKTLAQGKDLEQLQRRLGRTVQDVLSEAARSLERSGLTTWTVGTIPRTFTAEGTNGLVGYPALVDQGATVSLTVLPTEAEQRAAHWAGVRRLLLLGVPSPLKWVSGRLDNRAKLTLTQNPHGSLPALLADCSAAAADEILTEAGGPPWDAEGFGKLLDRVRAELNERVLELLRAAQQVIAEWRPLTTRLAEPVPAPLRPAVDDLTAQVGALVGPGFVAATGRRRLPDVRRYLAAANHRLDRLPGDVARDTARMARVHAVHAELDGFVAGLPPGRREADEVRQLRWMVEELRVSLFAQSLGTPYPVSEQRIYRAMDQLD*