ggKbase home page

PLM2_5_b1_sep16_scaffold_7093_1

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(1..1302)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4460A similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 485.0
  • Bit_score: 217
  • Evalue 2.20e-53
LigA {ECO:0000313|EMBL:EGD40700.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 454.0
  • Bit_score: 183
  • Evalue 4.90e-43
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 519.0
  • Bit_score: 169
  • Evalue 1.90e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioidaceae bacterium Broad-1 → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
GTGCCGGCGGCCGGTTCGGTGGGTTCGGCGGTTTCGGTGGCTAGCCGGCGGGTGGTGATCCCGGTCGCCGTCGCCGGGATTCTGGTCGTGACCGCCGGCGGCGTGGGCGCCTACGCGGCCGTGCGCGGACCGGCTGGTTCCTACCGGACGGCGGTCGCCGGCCAGCGGTCGGTGACCGCGACGCTGACCGCGACCGGGACGGTCGGGCCGGCGTCGTCGGCCACCGTCGCGTTCCCGGTCGCCGGCACTGTCGACTCCGTGCCGGTCGCGGTCGGCGACGCCGTCGCGGCGAACGCGACACTGGCCACACTGGACCCGACCGCGCTGACGTCGGCGCTGAACCGGGCGCAGTCGTCGCTGGCGCAGGCGAAGCTGACGCTGGAGCAGGACGAGAACGGGACCGGTACGGCGGCGGAGTTCACGGCGGTGGCGTTCTTCACCGCCGCGCGCGTGCCCGGCACCGGCCTGTCGGTCCCGGCCGCCCAGCGCGCGGTGCAGGAGGCGCAGCTGCGGGCCGACGCGGCACTGTCCACCGCGGACGGTGACCTGGCCGCGGCGAGCGTGGCGTGCGAGGGCGGCGAGCAGGGCTGGTCCGGCGCGCTCGGGTTCACGGCACCGACGCCGTCCGCGACACCGTCCACGGCGCCGACACCGAGCGCGACGCCGACGGCGCCGTCCGGTGGCGACTCCGCCGCCTGCCTGGCCGCCCTGCGGAAGGTGCTGGCCGACCAGACCGCGACGCAGAGGGCGCAGCAGGACGTCTCGGCCGCGCAGCAGGCCCTCACCACCGCGCTCGCCGACGAGGCCAAGGCGACTTCCGCGCCGAGCCCGTCCAAGCCCGGCGCCGGCGCGTCGAAGCCGACCAGCGGCGCATCCAAGTCGGGCACCGGCGGATCCAAGTCGGGCACCGGCGGATCCGGGCCGGCCGCCGGGTCCGGACAGCGCACCGGCGGCACGGCCGGCTCGCGCTCGGGCTCCGGACGCAGCGGCTCAGCCGGAACCGGCTCGGCCGGCGAGCCCGGCGCGACCGGCGGCCGCAGCGGAGGTGGCGGCGCGTCCTCCCGGCCGATCACGCCGGAGCAGATCACCGCGGACCAGGCGGCCGTCAACGCGGCCGCCGCCGAGGTCGCGGTGGCGCAGCAGAACCTCGCCGCGGCGACCATCCACAGCCCGATCGCCGGCACGGTCGCCGCGGTCGGCATCCAGCCGGGCGACCCGGTCTCGGCCGACTCGACCACCGCGACCATCGAGGTCATCGGCGCCGGACCGCTCGTCGTCACCGTTTCCGTCGACGTCACCAAG
PROTEIN sequence
Length: 434
VPAAGSVGSAVSVASRRVVIPVAVAGILVVTAGGVGAYAAVRGPAGSYRTAVAGQRSVTATLTATGTVGPASSATVAFPVAGTVDSVPVAVGDAVAANATLATLDPTALTSALNRAQSSLAQAKLTLEQDENGTGTAAEFTAVAFFTAARVPGTGLSVPAAQRAVQEAQLRADAALSTADGDLAAASVACEGGEQGWSGALGFTAPTPSATPSTAPTPSATPTAPSGGDSAACLAALRKVLADQTATQRAQQDVSAAQQALTTALADEAKATSAPSPSKPGAGASKPTSGASKSGTGGSKSGTGGSGPAAGSGQRTGGTAGSRSGSGRSGSAGTGSAGEPGATGGRSGGGGASSRPITPEQITADQAAVNAAAAEVAVAQQNLAAATIHSPIAGTVAAVGIQPGDPVSADSTTATIEVIGAGPLVVTVSVDVTK